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Aliases for PIR35009 Gene

Subcategory (RNA class) for PIR35009 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR35009 Gene

No Aliases found

ORGUL Members for PIR35009 Gene

Previous GeneCards Identifiers for PIR35009 Gene

  • GC21P045923
  • GC21P045933
  • GC21P045949
  • GC21P045954
  • GC21P045964
  • GC21P044503
  • GC21P044513
  • GC21P044527
  • GC21P044539
  • GC21P044551
  • GC21P044564
  • GC21P044577
  • GC21P044587

No data available for External Ids for PIR35009 Gene

Summaries for PIR35009 Gene

GeneCards Summary for PIR35009 Gene

PIR35009 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR35009 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR35009 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR35009 Gene

Genomics for PIR35009 Gene

GeneHancer (GH) Regulatory Elements for PIR35009 Gene

Promoters and enhancers for PIR35009 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J044497 Enhancer 0.6 ENCODE 650.7 -0.2 -196 0.8 USF1 TFE3 CEBPB MAX USF2 NFIL3 MITF SSRP1 RAD51 MBD1 GC21P044605 PIR56320 PIR40673 PIR48573 PIR35009 PIR45506 GC21P044459 TSPEAR
GH21J044505 Enhancer 0.9 FANTOM5 0.4 +7.3 7334 0.4 ELF3 FOXA2 MLX ARID4B DMAP1 RARA ETS1 CREM THAP11 ZHX2 TSPEAR-AS1 PIR35009 GC21P044459 TSPEAR
GH21J044504 Enhancer 0.3 Ensembl 0.4 +5.6 5626 0.4 ZIC2 TSPEAR-AS1 PIR35009 GC21P044459 TSPEAR
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR35009 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR35009 Gene

Genomic Locations for PIR35009 Gene
chr21:44,498,575-44,498,603
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr21:45,918,458-45,918,486
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR35009 Gene

Genes around PIR35009 on UCSC Golden Path with GeneCards custom track

PIR35009 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR35009 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR35009 Gene

Function for PIR35009 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR35009 Gene

Localization for PIR35009 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR35009 Gene

Pathways & Interactions for PIR35009 Gene

SuperPathways for PIR35009 Gene

No Data Available

Interacting Proteins for PIR35009 Gene

Gene Ontology (GO) - Biological Process for PIR35009 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR35009 Gene

Drugs & Compounds for PIR35009 Gene

No Compound Related Data Available

Transcripts for PIR35009 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR35009 Gene

No ASD Table

Relevant External Links for PIR35009 Gene

GeneLoc Exon Structure for
PIR35009

No data available for mRNA/cDNA for PIR35009 Gene

Expression for PIR35009 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR35009 Gene

Orthologs for PIR35009 Gene

No data available for Orthologs and Evolution for PIR35009 Gene

Paralogs for PIR35009 Gene

No data available for Paralogs for PIR35009 Gene

Variants for PIR35009 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR35009 Gene

Disorders for PIR35009 Gene

No disorders were found for PIR35009 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR35009 Gene

Publications for PIR35009 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR35009 Gene

Sources for PIR35009 Gene

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