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Aliases for PIR35005 Gene

Subcategory (RNA class) for PIR35005 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR35005 Gene

No Aliases found

ORGUL Members for PIR35005 Gene

Previous GeneCards Identifiers for PIR35005 Gene

  • GC12M003577
  • GC12M003618
  • GC12M003668
  • GC12M003690
  • GC12M003741
  • GC12M003471
  • GC12M003494
  • GC12M003518
  • GC12M003543
  • GC12M003653
  • GC12M003778
  • GC12M003807
  • GC12M003838

No data available for External Ids for PIR35005 Gene

Summaries for PIR35005 Gene

GeneCards Summary for PIR35005 Gene

PIR35005 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR35005 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR35005 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR35005 Gene

Genomics for PIR35005 Gene

GeneHancer (GH) Regulatory Elements for PIR35005 Gene

Promoters and enhancers for PIR35005 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J003456 Enhancer 0.7 ENCODE dbSUPER 650.7 +1.7 1702 0.2 CTCF RFX1 RAD21 ZBTB17 GC12M003884 GC12M003885 GC12M003889 GC12M003890 GC12M003892 PIR53980 PIR38223 PIR55868 PIR32756 PIR58091
GH12J003458 Enhancer 0.2 ENCODE 650.7 +0.5 452 0.2 GC12M003885 GC12M003889 GC12M003890 GC12M003892 PIR38223 PIR55868 PIR58091 PIR35005 PIR43057 PIR43448
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR35005 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR35005 Gene

Genomic Locations for PIR35005 Gene
chr12:3,458,653-3,458,682
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr12:3,567,819-3,567,848
(GRCh37/hg19)
Size:
30 bases
Orientation:
Minus strand

Genomic View for PIR35005 Gene

Genes around PIR35005 on UCSC Golden Path with GeneCards custom track

PIR35005 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR35005 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR35005 Gene

Function for PIR35005 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR35005 Gene

Localization for PIR35005 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR35005 Gene

Pathways & Interactions for PIR35005 Gene

SuperPathways for PIR35005 Gene

No Data Available

Interacting Proteins for PIR35005 Gene

Gene Ontology (GO) - Biological Process for PIR35005 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR35005 Gene

Drugs & Compounds for PIR35005 Gene

No Compound Related Data Available

Transcripts for PIR35005 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR35005 Gene

No ASD Table

Relevant External Links for PIR35005 Gene

GeneLoc Exon Structure for
PIR35005

No data available for mRNA/cDNA for PIR35005 Gene

Expression for PIR35005 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR35005 Gene

Orthologs for PIR35005 Gene

No data available for Orthologs and Evolution for PIR35005 Gene

Paralogs for PIR35005 Gene

No data available for Paralogs for PIR35005 Gene

Variants for PIR35005 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR35005 Gene

Disorders for PIR35005 Gene

No disorders were found for PIR35005 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR35005 Gene

Publications for PIR35005 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR35005 Gene

Sources for PIR35005 Gene

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