Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR34996 Gene

Subcategory (RNA class) for PIR34996 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR34996 Gene

No Aliases found

ORGUL Members for PIR34996 Gene

Previous GeneCards Identifiers for PIR34996 Gene

  • GC16P011268

No data available for External Ids for PIR34996 Gene

Summaries for PIR34996 Gene

GeneCards Summary for PIR34996 Gene

PIR34996 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR34996 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR34996 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR34996 Gene

Genomics for PIR34996 Gene

GeneHancer (GH) Regulatory Elements for PIR34996 Gene

Promoters and enhancers for PIR34996 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I011155 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 -18.8 -18832 0.9 HDAC1 MEIS2 PKNOX1 ATF1 TEAD4 JUN NEUROD1 FOSL1 GATA3 CTBP1 TNP2 ENSG00000212228 PRM3 RMI2 DEXI SOCS1 PIR34996 LOC105371081 CLEC16A GC16P010485
GH16I011161 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -12.3 -12266 1.6 L3MBTL2 CBFA2T3 ELF1 GATA3 ATF4 GATA2 EGR1 ADNP GATA1 CBFA2T2 RMI2 TNP2 ENSG00000212228 PRM3 CLEC16A DEXI PIR34996 LOC105371081 GC16P010485
GH16I011132 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -39.6 -39611 4.7 PKNOX1 ATF1 SIN3A FEZF1 ZNF766 FOS ATF7 DEK NCOA1 REST HNRNPCP4 RMI2 LOC105371081 PIR34996 CLEC16A GC16P010485
GH16I011137 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -34.9 -34932 3.1 FOXA2 MLX ZFP64 ARID4B ETS1 RUNX3 SP5 ZHX2 MIER2 PPARG ENSG00000212228 PRM3 TNP2 ENSG00000263033 LOC105371081 PIR34996 CLEC16A GC16P010485
GH16I011149 Enhancer 0.9 ENCODE 0.3 -25.3 -25272 0.1 HDAC1 ELF3 PKNOX1 ATF1 RAD21 RARA TCF12 GATA2 FOS ATF7 LOC105371081 PIR34996 CLEC16A GC16P010485
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR34996 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR34996 Gene

Genomic Locations for PIR34996 Gene
chr16:11,174,461-11,174,487
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr16:11,268,318-11,268,344
(GRCh37/hg19)

Genomic View for PIR34996 Gene

Genes around PIR34996 on UCSC Golden Path with GeneCards custom track

PIR34996 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR34996 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR34996 Gene

Proteins for PIR34996 Gene

Post-translational modifications for PIR34996 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR34996 Gene

Domains & Families for PIR34996 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR34996 Gene

Function for PIR34996 Gene

Phenotypes From GWAS Catalog for PIR34996 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR34996 Gene

Localization for PIR34996 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR34996 Gene

Pathways & Interactions for PIR34996 Gene

SuperPathways for PIR34996 Gene

No Data Available

Interacting Proteins for PIR34996 Gene

Gene Ontology (GO) - Biological Process for PIR34996 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR34996 Gene

Drugs & Compounds for PIR34996 Gene

No Compound Related Data Available

Transcripts for PIR34996 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR34996 Gene

No ASD Table

Relevant External Links for PIR34996 Gene

GeneLoc Exon Structure for
PIR34996

No data available for mRNA/cDNA for PIR34996 Gene

Expression for PIR34996 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR34996 Gene

Orthologs for PIR34996 Gene

No data available for Orthologs and Evolution for PIR34996 Gene

Paralogs for PIR34996 Gene

No data available for Paralogs for PIR34996 Gene

Variants for PIR34996 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR34996 Gene

Disorders for PIR34996 Gene

No disorders were found for PIR34996 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR34996 Gene

Publications for PIR34996 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR34996 Gene

Sources for PIR34996 Gene

Content
Loading form....