Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR34994 Gene

Subcategory (RNA class) for PIR34994 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR34994 Gene

No Aliases found

ORGUL Members for PIR34994 Gene

Previous GeneCards Identifiers for PIR34994 Gene

  • GC02P174085

No data available for External Ids for PIR34994 Gene

Summaries for PIR34994 Gene

GeneCards Summary for PIR34994 Gene

PIR34994 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR34994 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR34994 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR34994 Gene

Genomics for PIR34994 Gene

GeneHancer (GH) Regulatory Elements for PIR34994 Gene

Promoters and enhancers for PIR34994 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J173209 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 -10.5 -10505 2 PKNOX1 FOXA2 ARNT SIN3A ZNF2 YY1 E2F8 ARID2 ZNF143 FOS MAP3K20 SP3 LOC100289479 CDCA7 MAP3K20-AS1 PIR34994 GC02P173132
GH02J173218 Enhancer 0.6 Ensembl 0.7 -2.5 -2529 0.6 PKNOX1 PRDM6 ZBTB48 HLF CEBPA CEBPB CEBPG ZNF7 LOC100289479 CDCA7 PIR34994 MAP3K20-AS1 GC02P173132 MAP3K20
GH02J173249 Enhancer 1.3 VISTA UCNEbase 0.3 +29.2 29194 1.6 BCOR MXI1 PKNOX1 FEZF1 ZIC2 ZNF2 ZNF335 POLR2A ADNP ZSCAN5C CDCA7 LOC100289479 PIR34994 MAP3K20-AS1 MAP3K20
GH02J173231 Enhancer 0.9 Ensembl ENCODE 0.4 +10.2 10240 0.9 FOXA2 MLX MAX ZNF644 RAD21 YY1 EGR1 HNF4G GATAD2A SOX5 MAP3K20 PIR34994 MAP3K20-AS1
GH02J173183 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -36.6 -36630 2 HDAC1 KLF17 ZBTB40 ZEB1 ZNF366 RCOR1 FOS CEBPB REST ZEB2 MAP3K20 MAP3K20-AS1 PIR34994 GC02P173132
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR34994 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR34994 Gene

Genomic Locations for PIR34994 Gene
chr2:173,221,230-173,221,257
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr2:174,085,958-174,085,985
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR34994 Gene

Genes around PIR34994 on UCSC Golden Path with GeneCards custom track

PIR34994 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR34994 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR34994 Gene

Function for PIR34994 Gene

Phenotypes From GWAS Catalog for PIR34994 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR34994 Gene

Localization for PIR34994 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR34994 Gene

Pathways & Interactions for PIR34994 Gene

SuperPathways for PIR34994 Gene

No Data Available

Interacting Proteins for PIR34994 Gene

Gene Ontology (GO) - Biological Process for PIR34994 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR34994 Gene

Drugs & Compounds for PIR34994 Gene

No Compound Related Data Available

Transcripts for PIR34994 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR34994 Gene

No ASD Table

Relevant External Links for PIR34994 Gene

GeneLoc Exon Structure for
PIR34994

No data available for mRNA/cDNA for PIR34994 Gene

Expression for PIR34994 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR34994 Gene

Orthologs for PIR34994 Gene

No data available for Orthologs and Evolution for PIR34994 Gene

Paralogs for PIR34994 Gene

No data available for Paralogs for PIR34994 Gene

Variants for PIR34994 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR34994 Gene

Disorders for PIR34994 Gene

No disorders were found for PIR34994 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR34994 Gene

Publications for PIR34994 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR34994 Gene

Sources for PIR34994 Gene

Content
Loading form....