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Aliases for PIR34953 Gene

Subcategory (RNA class) for PIR34953 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR34953 Gene

No Aliases found

ORGUL Members for PIR34953 Gene

Previous GeneCards Identifiers for PIR34953 Gene

  • GC12P109971

No data available for External Ids for PIR34953 Gene

Summaries for PIR34953 Gene

GeneCards Summary for PIR34953 Gene

PIR34953 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR34953 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR34953 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR34953 Gene

Genomics for PIR34953 Gene

GeneHancer (GH) Regulatory Elements for PIR34953 Gene

Promoters and enhancers for PIR34953 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J109529 Enhancer 0.6 ENCODE dbSUPER 0.7 -4.1 -4065 0.2 RCOR1 NR2F2 TRPV4 MYO1H PIR34953 GC12P109501 PIR31921 UBE3B
GH12J109517 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -15.1 -15088 2.9 CTCF ZNF654 RB1 JUN BHLHE40 TRIM22 REST RAD21 XRCC5 POLR2A KCTD10 MVK FAM222A-AS1 RNU4-32P MMAB ENSG00000255655 PIR34953 GC12P109501 PIR31921 UBE3B
GH12J109540 Enhancer 0.8 ENCODE dbSUPER 0.4 +8.1 8052 3 CTCF RARA SKI ZNF23 MLLT1 SMAD4 RCOR1 CHD2 ZBTB17 SPI1 KCTD10 MVK MMAB RNU4-32P MYO1H PIR34953 GC12M109568 UBE3B
GH12J109544 Enhancer 0.6 Ensembl ENCODE 0.4 +11.1 11123 0.9 ZIC2 ETV5 MVK MMAB MYO1H RNU4-32P KCTD10 PIR34953 GC12M109568
GH12J109553 Enhancer 0.5 dbSUPER 0.4 +19.9 19945 2.1 ZNF664 TFAP4 FOXA2 POLR2A SCRT2 EZH2 KCTD10 MYO1H FAM222A-AS1 ENSG00000255655 TRPV4 MMAB GC12M109568 RNU4-32P PIR34953
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR34953 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR34953 Gene

Genomic Locations for PIR34953 Gene
chr12:109,534,116-109,534,145
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr12:109,971,921-109,971,950
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR34953 Gene

Genes around PIR34953 on UCSC Golden Path with GeneCards custom track

PIR34953 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR34953 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR34953 Gene

Function for PIR34953 Gene

Phenotypes From GWAS Catalog for PIR34953 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR34953 Gene

Localization for PIR34953 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR34953 Gene

Pathways & Interactions for PIR34953 Gene

SuperPathways for PIR34953 Gene

No Data Available

Interacting Proteins for PIR34953 Gene

Gene Ontology (GO) - Biological Process for PIR34953 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR34953 Gene

Drugs & Compounds for PIR34953 Gene

No Compound Related Data Available

Transcripts for PIR34953 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR34953 Gene

No ASD Table

Relevant External Links for PIR34953 Gene

GeneLoc Exon Structure for
PIR34953

No data available for mRNA/cDNA for PIR34953 Gene

Expression for PIR34953 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR34953 Gene

Orthologs for PIR34953 Gene

No data available for Orthologs and Evolution for PIR34953 Gene

Paralogs for PIR34953 Gene

No data available for Paralogs for PIR34953 Gene

Variants for PIR34953 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR34953 Gene

Disorders for PIR34953 Gene

No disorders were found for PIR34953 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR34953 Gene

Publications for PIR34953 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR34953 Gene

Sources for PIR34953 Gene

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