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Aliases for PIR34891 Gene

Subcategory (RNA class) for PIR34891 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR34891 Gene

No Aliases found

ORGUL Members for PIR34891 Gene

Previous GeneCards Identifiers for PIR34891 Gene

  • GC05M134699

No data available for External Ids for PIR34891 Gene

Summaries for PIR34891 Gene

GeneCards Summary for PIR34891 Gene

PIR34891 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR34891 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR34891 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR34891 Gene

Genomics for PIR34891 Gene

GeneHancer (GH) Regulatory Elements for PIR34891 Gene

Promoters and enhancers for PIR34891 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J135364 Enhancer 0.6 dbSUPER 650.7 -1.3 -1335 2.3 MZF1 MNT FEZF1 OSR2 PRDM6 ZSCAN5C ZNF600 WT1 ZBTB17 PIR34891 ENSG00000270021 H2AFY
GH05J135388 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 -31.1 -31116 12.8 HDGF PKNOX1 FOXA2 ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B ZNF766 H2AFY DDX46 ENSG00000270021 SMAD5 C5orf66 NEUROG1 LOC105379188 ENSG00000248753 ENSG00000270892 ENSG00000253927
GH05J135357 Enhancer 0.6 dbSUPER 0.7 +3.9 3943 4.6 ZIC2 NR2F2 PRDM6 ZFHX2 ZNF585B PRDM1 ZBTB17 EGR2 ENSG00000270021 H2AFY DCANP1 TXNDC15 JADE2 PIR34891 GC05M135339 C5orf66
GH05J135376 Enhancer 1 FANTOM5 ENCODE dbSUPER 0.4 -13.5 -13547 1.4 JUNB BATF ZIC2 IRF4 POLR2A EED ETV6 RCOR1 RUNX3 ENSG00000270021 H2AFY SLC25A48 PIR34891
GH05J135383 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -22.1 -22086 4.7 HDAC1 NFIB ARNT NFXL1 RFX5 TCF12 ZNF280A ATF7 CREM SMARCA5 ENSG00000270021 H2AFY PIR34891
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR34891 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR34891 Gene

Genomic Locations for PIR34891 Gene
chr5:135,364,073-135,364,102
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr5:134,699,763-134,699,792
(GRCh37/hg19)
Size:
30 bases
Orientation:
Minus strand

Genomic View for PIR34891 Gene

Genes around PIR34891 on UCSC Golden Path with GeneCards custom track

PIR34891 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR34891 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR34891 Gene

Function for PIR34891 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR34891 Gene

Localization for PIR34891 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR34891 Gene

Pathways & Interactions for PIR34891 Gene

SuperPathways for PIR34891 Gene

No Data Available

Interacting Proteins for PIR34891 Gene

Gene Ontology (GO) - Biological Process for PIR34891 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR34891 Gene

Drugs & Compounds for PIR34891 Gene

No Compound Related Data Available

Transcripts for PIR34891 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR34891 Gene

No ASD Table

Relevant External Links for PIR34891 Gene

GeneLoc Exon Structure for
PIR34891

No data available for mRNA/cDNA for PIR34891 Gene

Expression for PIR34891 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR34891 Gene

Orthologs for PIR34891 Gene

No data available for Orthologs and Evolution for PIR34891 Gene

Paralogs for PIR34891 Gene

No data available for Paralogs for PIR34891 Gene

Variants for PIR34891 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR34891 Gene

Disorders for PIR34891 Gene

No disorders were found for PIR34891 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR34891 Gene

Publications for PIR34891 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR34891 Gene

Sources for PIR34891 Gene

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