Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR34886 Gene

Subcategory (RNA class) for PIR34886 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR34886 Gene

No Aliases found

ORGUL Members for PIR34886 Gene

Previous GeneCards Identifiers for PIR34886 Gene

  • GC01P009307

No data available for External Ids for PIR34886 Gene

Summaries for PIR34886 Gene

GeneCards Summary for PIR34886 Gene

PIR34886 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR34886 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR34886 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR34886 Gene

Genomics for PIR34886 Gene

GeneHancer (GH) Regulatory Elements for PIR34886 Gene

Promoters and enhancers for PIR34886 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J018283 Enhancer 0.8 ENCODE dbSUPER 0.7 -4.2 -4158 0.2 SMARCA5 PKNOX1 ZNF687 RFX1 MAX EBF1 BMI1 MEF2B ELF1 DPF2 PIR34886 GC01P018288 IGSF21-AS1 IGSF21
GH01J018297 Enhancer 0.8 ENCODE dbSUPER 0.4 +11.1 11100 1.9 CTCF USF1 NANOG TRIM22 ZIC2 ZNF623 RAD21 ETS1 SP1 GATA3 GC01P018288 PIR34886 GC01P018324 IGSF21
GH01J018293 Enhancer 0.7 ENCODE dbSUPER 0.4 +7.8 7842 3.4 SP1 POLR2A NANOG POU5F1 ZNF143 ZFP36 ETS1 PIR34886 GC01P018288 GC01P018324 IGSF21
GH01J018299 Enhancer 0.7 ENCODE dbSUPER 0.4 +12.2 12172 0.2 CTCF TRIM22 ZNF143 SMC3 RAD21 PIR34886 GC01P018288 GC01P018324 IGSF21
GH01J018256 Enhancer 0.9 ENCODE dbSUPER 0.3 -31.2 -31248 0.2 ELF3 ZNF792 SIN3A ERF ZIC2 KMT2B ZNF48 ZSCAN9 RARA ZBTB48 IGSF21 PIR34886 GC01P018288 IGSF21-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR34886 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR34886 Gene

Genomic Locations for PIR34886 Gene
chr1:18,287,730-18,287,760
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr1:9,307,112-9,307,142
(GRCh37/hg19)
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR34886 Gene

Genes around PIR34886 on UCSC Golden Path with GeneCards custom track

PIR34886 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR34886 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR34886 Gene

Function for PIR34886 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR34886 Gene

Localization for PIR34886 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR34886 Gene

Pathways & Interactions for PIR34886 Gene

SuperPathways for PIR34886 Gene

No Data Available

Interacting Proteins for PIR34886 Gene

Gene Ontology (GO) - Biological Process for PIR34886 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR34886 Gene

Drugs & Compounds for PIR34886 Gene

No Compound Related Data Available

Transcripts for PIR34886 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR34886 Gene

No ASD Table

Relevant External Links for PIR34886 Gene

GeneLoc Exon Structure for
PIR34886

No data available for mRNA/cDNA for PIR34886 Gene

Expression for PIR34886 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR34886 Gene

Orthologs for PIR34886 Gene

No data available for Orthologs and Evolution for PIR34886 Gene

Paralogs for PIR34886 Gene

No data available for Paralogs for PIR34886 Gene

Variants for PIR34886 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR34886 Gene

Disorders for PIR34886 Gene

No disorders were found for PIR34886 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR34886 Gene

Publications for PIR34886 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR34886 Gene

Sources for PIR34886 Gene

Content
Loading form....