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Aliases for PIR34883 Gene

Subcategory (RNA class) for PIR34883 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR34883 Gene

No Aliases found

ORGUL Members for PIR34883 Gene

Previous GeneCards Identifiers for PIR34883 Gene

  • GC10M069259

No data available for External Ids for PIR34883 Gene

Summaries for PIR34883 Gene

GeneCards Summary for PIR34883 Gene

PIR34883 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR34883 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR34883 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR34883 Gene

Genomics for PIR34883 Gene

GeneHancer (GH) Regulatory Elements for PIR34883 Gene

Promoters and enhancers for PIR34883 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J067492 Enhancer 0.6 ENCODE 0.4 +5.1 5141 0.3 SMARCE1 REST DPF2 FOXA1 SP1 ZNF217 CTBP1 GATA3 ZFP36 CUX1 CTNNA3 PIR34883 PIR36242
GH10J067521 Enhancer 0.6 ENCODE 0.3 -23.4 -23419 0.1 SMARCA5 CTCF ZNF654 TRIM22 REST RAD21 ZNF664 SMC3 ZNF143 CTNNA3 PIR34883 AKR1B10P1
GH10J067667 Promoter 0.8 EPDnew 0.1 -167.9 -167901 0.1 ZNF148 ZNF335 PKNOX1 POLR2A DPF2 CTNNA3 AKR1B10P1 PIR34883
GH10J067613 Enhancer 0.7 ENCODE 0.1 -115.6 -115589 0.3 BACH1 BMI1 BATF ZNF143 ATF7 FOS IKZF2 RUNX3 SMARCA5 NR2F1 PIR34883 AKR1B10P1 CTNNA3
GH10J067666 Enhancer 0.7 ENCODE 0.1 -169.0 -168959 0.1 CTCF PKNOX1 BACH1 CEBPG RAD21 ZNF316 ZNF143 SMC3 NFE2 MAFK AKR1B10P1 CTNNA3 PIR34883
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR34883 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR34883 Gene

Genomic Locations for PIR34883 Gene
chr10:67,497,661-67,497,689
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr10:69,257,419-69,257,447
(GRCh37/hg19)
Size:
29 bases
Orientation:
Minus strand

Genomic View for PIR34883 Gene

Genes around PIR34883 on UCSC Golden Path with GeneCards custom track

PIR34883 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR34883 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR34883 Gene

Function for PIR34883 Gene

Phenotypes From GWAS Catalog for PIR34883 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR34883 Gene

Localization for PIR34883 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR34883 Gene

Pathways & Interactions for PIR34883 Gene

SuperPathways for PIR34883 Gene

No Data Available

Interacting Proteins for PIR34883 Gene

Gene Ontology (GO) - Biological Process for PIR34883 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR34883 Gene

Drugs & Compounds for PIR34883 Gene

No Compound Related Data Available

Transcripts for PIR34883 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR34883 Gene

No ASD Table

Relevant External Links for PIR34883 Gene

GeneLoc Exon Structure for
PIR34883

No data available for mRNA/cDNA for PIR34883 Gene

Expression for PIR34883 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR34883 Gene

Orthologs for PIR34883 Gene

No data available for Orthologs and Evolution for PIR34883 Gene

Paralogs for PIR34883 Gene

No data available for Paralogs for PIR34883 Gene

Variants for PIR34883 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR34883 Gene

Disorders for PIR34883 Gene

No disorders were found for PIR34883 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR34883 Gene

Publications for PIR34883 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR34883 Gene

Sources for PIR34883 Gene

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