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Aliases for PIR34879 Gene

Subcategory (RNA class) for PIR34879 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR34879 Gene

No Aliases found

ORGUL Members for PIR34879 Gene

Previous GeneCards Identifiers for PIR34879 Gene

  • GC08P105271

No data available for External Ids for PIR34879 Gene

Summaries for PIR34879 Gene

GeneCards Summary for PIR34879 Gene

PIR34879 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR34879 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR34879 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR34879 Gene

Genomics for PIR34879 Gene

GeneHancer (GH) Regulatory Elements for PIR34879 Gene

Promoters and enhancers for PIR34879 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I104222 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.3 -35.6 -35626 1.5 MXI1 ZNF777 ZBTB6 SIN3A ZIC2 ZNF335 ZFHX2 MTA3 GLIS2 POLR2A RIMS2 PIR34879 LOC105375688
GH08I104277 Enhancer 1 FANTOM5 ENCODE 0.4 +19.4 19396 1.8 EBF1 BMI1 BATF IRF4 YY1 RELA NFATC1 ZNF143 ATF7 IKZF2 RIMS2 LRP12 PIR34879 DCSTAMP
GH08I104272 Enhancer 0.6 ENCODE 0.4 +14.0 13958 1.3 SMARCE1 FOXA1 GATA3 CTBP1 IKZF1 FOS RUNX3 IKZF2 RIMS2 PIR34879 DCSTAMP
GH08I104329 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.2 +71.0 71006 1.6 CTCF EBF1 BATF RAD21 FOSL1 CTBP1 POLR2A VEZF1 ZNF207 ZNF143 DCSTAMP PIR34879 DPYS
GH08I104336 Enhancer 1 FANTOM5 ENCODE 0.2 +77.8 77758 0.9 HDAC1 ATF1 TCF12 ZNF366 FOS RCOR1 ATF7 CREM ZEB2 SMARCA4 DCSTAMP LRP12 PIR34879 DPYS
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR34879 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR34879 Gene

Genomic Locations for PIR34879 Gene
chr8:104,259,290-104,259,320
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr8:105,271,518-105,271,548
(GRCh37/hg19)

Genomic View for PIR34879 Gene

Genes around PIR34879 on UCSC Golden Path with GeneCards custom track

PIR34879 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR34879 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR34879 Gene

Proteins for PIR34879 Gene

Post-translational modifications for PIR34879 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR34879 Gene

Domains & Families for PIR34879 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR34879 Gene

Function for PIR34879 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR34879 Gene

Localization for PIR34879 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR34879 Gene

Pathways & Interactions for PIR34879 Gene

SuperPathways for PIR34879 Gene

No Data Available

Interacting Proteins for PIR34879 Gene

Gene Ontology (GO) - Biological Process for PIR34879 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR34879 Gene

Drugs & Compounds for PIR34879 Gene

No Compound Related Data Available

Transcripts for PIR34879 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR34879 Gene

No ASD Table

Relevant External Links for PIR34879 Gene

GeneLoc Exon Structure for
PIR34879

No data available for mRNA/cDNA for PIR34879 Gene

Expression for PIR34879 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR34879 Gene

Orthologs for PIR34879 Gene

No data available for Orthologs and Evolution for PIR34879 Gene

Paralogs for PIR34879 Gene

No data available for Paralogs for PIR34879 Gene

Variants for PIR34879 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR34879 Gene

Disorders for PIR34879 Gene

No disorders were found for PIR34879 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR34879 Gene

Publications for PIR34879 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR34879 Gene

Sources for PIR34879 Gene

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