Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR34852 Gene

Subcategory (RNA class) for PIR34852 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR34852 Gene

No Aliases found

ORGUL Members for PIR34852 Gene

Previous GeneCards Identifiers for PIR34852 Gene

  • GC03M183322

No data available for External Ids for PIR34852 Gene

Summaries for PIR34852 Gene

GeneCards Summary for PIR34852 Gene

PIR34852 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR34852 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR34852

Additional gene information for PIR34852 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR34852 Gene

Genomics for PIR34852 Gene

GeneHancer (GH) Regulatory Elements for PIR34852 Gene

Promoters and enhancers for PIR34852 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I183591 Enhancer 1 Ensembl ENCODE 0.4 +12.2 12193 0.6 PKNOX1 BMI1 BATF KLF5 IRF4 RAD21 ATF7 ETV6 IKZF2 RUNX3 KLHL6 KLHL24 YEATS2 MCF2L2 GC03M183605 PIR34852
GH03I183580 Enhancer 0.9 Ensembl ENCODE 0.3 +23.8 23761 1.1 HDGF EBF1 ZFHX2 EGR1 ATF7 RUNX3 IKZF2 EGR2 RNF2 DPF2 KLHL6 MCF2L2 GC03M183605 PIR34852
GH03I183582 Enhancer 0.9 Ensembl ENCODE 0.3 +20.1 20065 3 MEIS2 PKNOX1 ETV1 TEAD4 TAL1 YY1 TCF12 POLR2A HNF4G PRDM10 KLHL6 KLHL24 YEATS2 MCF2L2 YEATS2-AS1 GC03M183605 PIR34852
GH03I183563 Enhancer 0.7 Ensembl ENCODE 0.3 +40.3 40283 0.8 ZNF316 JUN JUNB MAFG NFE2 EMSY NFE2L2 KLHL24 MCF2L2 KLHL6 GC03M183605 PIR34852
GH03I183587 Enhancer 0.4 Ensembl 0.4 +16.7 16718 0.8 HDGF POLR2A ETV6 KLHL6 KLHL24 YEATS2 MCF2L2 PIR34852 GC03M183605
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR34852 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR34852 Gene

Genomic Locations for PIR34852 Gene
chr3:183,604,289-183,604,319
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand
chr3:183,322,077-183,322,107
(GRCh37/hg19)

Genomic View for PIR34852 Gene

Genes around PIR34852 on UCSC Golden Path with GeneCards custom track

PIR34852 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR34852 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR34852 Gene

ORGUL Member Location for PIR34852 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR34852 Gene

Proteins for PIR34852 Gene

Post-translational modifications for PIR34852 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR34852 Gene

Domains & Families for PIR34852 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR34852 Gene

Function for PIR34852 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR34852 Gene

Localization for PIR34852 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR34852 Gene

Pathways & Interactions for PIR34852 Gene

SuperPathways for PIR34852 Gene

No Data Available

Interacting Proteins for PIR34852 Gene

Gene Ontology (GO) - Biological Process for PIR34852 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR34852 Gene

Drugs & Compounds for PIR34852 Gene

No Compound Related Data Available

Transcripts for PIR34852 Gene

fRNAdb Secondary structures for PIR34852 Gene

  • FR183015

Alternative Splicing Database (ASD) splice patterns (SP) for PIR34852 Gene

No ASD Table

Relevant External Links for PIR34852 Gene

GeneLoc Exon Structure for
PIR34852

No data available for mRNA/cDNA for PIR34852 Gene

Expression for PIR34852 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR34852 Gene

Orthologs for PIR34852 Gene

No data available for Orthologs and Evolution for PIR34852 Gene

Paralogs for PIR34852 Gene

No data available for Paralogs for PIR34852 Gene

Variants for PIR34852 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR34852 Gene

Disorders for PIR34852 Gene

No disorders were found for PIR34852 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR34852 Gene

Publications for PIR34852 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR34852 Gene

Sources for PIR34852 Gene

Content
Loading form....