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Aliases for PIR34848 Gene

Subcategory (RNA class) for PIR34848 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR34848 Gene

No Aliases found

ORGUL Members for PIR34848 Gene

Previous GeneCards Identifiers for PIR34848 Gene

  • GC07P030928

No data available for External Ids for PIR34848 Gene

Summaries for PIR34848 Gene

GeneCards Summary for PIR34848 Gene

PIR34848 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR34848 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR34848 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR34848 Gene

Genomics for PIR34848 Gene

GeneHancer (GH) Regulatory Elements for PIR34848 Gene

Promoters and enhancers for PIR34848 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I030888 Enhancer 0.9 Ensembl ENCODE dbSUPER 550.8 -0.1 -80 0.2 FOSL1 POLR2A HMBOX1 FOS PIR34848 OSBPL9P6 AQP1 ENSG00000250424 MINDY4 INMT-MINDY4
GH07I030886 Enhancer 0.4 ENCODE dbSUPER 550.8 -2.0 -1977 1.2 PIR34848 AQP1 ENSG00000250424 MINDY4 INMT-MINDY4
GH07I030869 Enhancer 0.7 ENCODE dbSUPER 0.4 -18.8 -18781 1.4 JUND GLIS2 GLIS1 JUN RCOR1 PIR34848 ENSG00000250424 MINDY4 INMT-MINDY4
GH07I030863 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.3 -25.3 -25331 1.3 CREB1 ENSG00000250424 PIR34848 MINDY4 INMT-MINDY4
GH07I030851 Enhancer 0.6 Ensembl ENCODE dbSUPER 0.3 -36.3 -36339 2.2 ENSG00000250424 INMT CRHR2 PIR34848 MINDY4 INMT-MINDY4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR34848 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR34848 Gene

Genomic Locations for PIR34848 Gene
chr7:30,888,981-30,889,007
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr7:30,928,596-30,928,622
(GRCh37/hg19)

Genomic View for PIR34848 Gene

Genes around PIR34848 on UCSC Golden Path with GeneCards custom track

PIR34848 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR34848 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR34848 Gene

Proteins for PIR34848 Gene

Post-translational modifications for PIR34848 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR34848 Gene

Domains & Families for PIR34848 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR34848 Gene

Function for PIR34848 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR34848 Gene

Localization for PIR34848 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR34848 Gene

Pathways & Interactions for PIR34848 Gene

SuperPathways for PIR34848 Gene

No Data Available

Interacting Proteins for PIR34848 Gene

Gene Ontology (GO) - Biological Process for PIR34848 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR34848 Gene

Drugs & Compounds for PIR34848 Gene

No Compound Related Data Available

Transcripts for PIR34848 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR34848 Gene

No ASD Table

Relevant External Links for PIR34848 Gene

GeneLoc Exon Structure for
PIR34848

No data available for mRNA/cDNA for PIR34848 Gene

Expression for PIR34848 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR34848 Gene

Orthologs for PIR34848 Gene

No data available for Orthologs and Evolution for PIR34848 Gene

Paralogs for PIR34848 Gene

No data available for Paralogs for PIR34848 Gene

Variants for PIR34848 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR34848 Gene

Disorders for PIR34848 Gene

No disorders were found for PIR34848 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR34848 Gene

Publications for PIR34848 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR34848 Gene

Sources for PIR34848 Gene

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