Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR34840 Gene

Subcategory (RNA class) for PIR34840 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR34840 Gene

No Aliases found

ORGUL Members for PIR34840 Gene

Previous GeneCards Identifiers for PIR34840 Gene

  • GC0XM047836

No data available for External Ids for PIR34840 Gene

Summaries for PIR34840 Gene

GeneCards Summary for PIR34840 Gene

PIR34840 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR34840 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR34840 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR34840 Gene

Genomics for PIR34840 Gene

GeneHancer (GH) Regulatory Elements for PIR34840 Gene

Promoters and enhancers for PIR34840 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI048002 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.3 -27.0 -27016 2.3 ATF1 FOXA2 ZNF133 ARID4B FEZF1 ZNF2 BRCA1 YY1 ETS1 POLR2B SPACA5 ZNF182 ENSG00000228343 PIR34840 ZNF630 ZNF81
GH0XI047991 Enhancer 0.3 Ensembl 0.4 -14.9 -14851 0.2 ZNF548 ENSG00000204620 ZNF81 INE1 FTSJ1 RBM3 LINC01560 ENSG00000228343 PIR34840 ZNF182 ZNF630
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR34840 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR34840 Gene

Genomic Locations for PIR34840 Gene
chrX:47,976,621-47,976,650
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chrX:47,836,020-47,836,049
(GRCh37/hg19)

Genomic View for PIR34840 Gene

Genes around PIR34840 on UCSC Golden Path with GeneCards custom track

PIR34840 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR34840 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR34840 Gene

Proteins for PIR34840 Gene

Post-translational modifications for PIR34840 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR34840 Gene

Domains & Families for PIR34840 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR34840 Gene

Function for PIR34840 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR34840 Gene

Localization for PIR34840 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR34840 Gene

Pathways & Interactions for PIR34840 Gene

SuperPathways for PIR34840 Gene

No Data Available

Interacting Proteins for PIR34840 Gene

Gene Ontology (GO) - Biological Process for PIR34840 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR34840 Gene

Drugs & Compounds for PIR34840 Gene

No Compound Related Data Available

Transcripts for PIR34840 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR34840 Gene

No ASD Table

Relevant External Links for PIR34840 Gene

GeneLoc Exon Structure for
PIR34840

No data available for mRNA/cDNA for PIR34840 Gene

Expression for PIR34840 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR34840 Gene

Orthologs for PIR34840 Gene

No data available for Orthologs and Evolution for PIR34840 Gene

Paralogs for PIR34840 Gene

No data available for Paralogs for PIR34840 Gene

Variants for PIR34840 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR34840 Gene

Disorders for PIR34840 Gene

No disorders were found for PIR34840 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR34840 Gene

Publications for PIR34840 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR34840 Gene

Sources for PIR34840 Gene

Content
Loading form....