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Aliases for PIR34804 Gene

Subcategory (RNA class) for PIR34804 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR34804 Gene

No Aliases found

ORGUL Members for PIR34804 Gene

Previous GeneCards Identifiers for PIR34804 Gene

  • GC16P004937

No data available for External Ids for PIR34804 Gene

Summaries for PIR34804 Gene

GeneCards Summary for PIR34804 Gene

PIR34804 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR34804 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR34804 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR34804 Gene

Genomics for PIR34804 Gene

GeneHancer (GH) Regulatory Elements for PIR34804 Gene

Promoters and enhancers for PIR34804 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J004888 Enhancer 0.5 Ensembl dbSUPER 600.7 +1.1 1120 0.2 ZNF362 PIR34804 SEPTIN12 LOC105371064 PPL
GH16J004889 Enhancer 0.5 dbSUPER 600.7 +2.0 1984 1.1 POLR2A ZBTB33 MAX ZNF362 PIR34804 UBN1 GLYR1 PPL SEPTIN12 ZNF500 LOC105371064
GH16J004887 Enhancer 0.2 dbSUPER 600.7 0.0 -14 0.7 PIR34804 SEPTIN12 NMRAL1 PIR42687 PPL
GH16J004892 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.7 +4.6 4635 1.2 ZIC2 ZNF341 POLR2A GLIS1 KLF1 PPL GLYR1 UBN1 SEPTIN12 LOC105371064 PIR34804
GH16J004894 Enhancer 0.5 FANTOM5 0.4 +7.0 6987 0.2 CBFA2T2 SP2 NFYA NFYB USF1 USF2 LOC105371064 GLYR1 PPL UBN1 SEPTIN12 C16orf71 HMOX2 SEC14L5 ROGDI CDIP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR34804 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR34804 Gene

Genomic Locations for PIR34804 Gene
chr16:4,887,981-4,888,007
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr16:4,937,982-4,938,008
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR34804 Gene

Genes around PIR34804 on UCSC Golden Path with GeneCards custom track

PIR34804 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR34804 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR34804 Gene

Proteins for PIR34804 Gene

Post-translational modifications for PIR34804 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR34804 Gene

Domains & Families for PIR34804 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR34804 Gene

Function for PIR34804 Gene

Phenotypes From GWAS Catalog for PIR34804 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR34804 Gene

Localization for PIR34804 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR34804 Gene

Pathways & Interactions for PIR34804 Gene

PathCards logo

SuperPathways for PIR34804 Gene

No Data Available

Interacting Proteins for PIR34804 Gene

Gene Ontology (GO) - Biological Process for PIR34804 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR34804 Gene

Drugs & Compounds for PIR34804 Gene

No Compound Related Data Available

Transcripts for PIR34804 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR34804 Gene

No ASD Table

Relevant External Links for PIR34804 Gene

GeneLoc Exon Structure for
PIR34804

No data available for mRNA/cDNA for PIR34804 Gene

Expression for PIR34804 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR34804 Gene

Orthologs for PIR34804 Gene

No data available for Orthologs and Evolution for PIR34804 Gene

Paralogs for PIR34804 Gene

No data available for Paralogs for PIR34804 Gene

Variants for PIR34804 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR34804 Gene

Disorders for PIR34804 Gene

No disorders were found for PIR34804 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR34804 Gene

Publications for PIR34804 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR34804 Gene

Products for PIR34804 Gene

Sources for PIR34804 Gene

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