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Aliases for PIR34546 Gene

Subcategory (RNA class) for PIR34546 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR34546 Gene

No Aliases found

ORGUL Members for PIR34546 Gene

Previous GeneCards Identifiers for PIR34546 Gene

  • GC10P046976

No data available for External Ids for PIR34546 Gene

Summaries for PIR34546 Gene

GeneCards Summary for PIR34546 Gene

PIR34546 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR34546 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR34546 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR34546 Gene

Genomics for PIR34546 Gene

GeneHancer (GH) Regulatory Elements for PIR34546 Gene

Promoters and enhancers for PIR34546 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J046574 Enhancer 0.6 ENCODE 600.7 -1.6 -1608 1.7 NFIB NFIC NR2F2 PRDM4 RCOR1 ZNF143 MYC MAX PIR34546 ANXA8L1 SYT15
GH10J046572 Enhancer 0.4 ENCODE 600.7 +0.1 52 0.2 ESRRA SIN3A MNT PIR34546 GPRIN2
GH10J046573 Enhancer 0.2 ENCODE 600.7 -0.5 -528 0.1 PIR34546 SYT15
GH10J046565 Enhancer 1.2 ENCODE dbSUPER 0.4 +7.1 7062 0.4 SP1 CC2D1A CTCF ELF3 ZSCAN21 MAFK SP7 ELF1 ZNF174 PPARG WASHC2C PARGP1 BMS1P1 FAM21FP GPRIN2 PIR34546
GH10J046566 Enhancer 0.9 ENCODE dbSUPER 0.4 +6.8 6772 0.2 MAFK ZNF174 CEBPG ATF1 CTCF ATF7 ZNF501 CEBPB SCRT2 ATF2 WASHC2C PARGP1 FAM21FP PIR34546 GPRIN2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR34546 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR34546 Gene

Genomic Locations for PIR34546 Gene
chr10:46,572,926-46,572,954
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr10:46,976,662-46,976,690
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR34546 Gene

Genes around PIR34546 on UCSC Golden Path with GeneCards custom track

PIR34546 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR34546 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR34546 Gene

Proteins for PIR34546 Gene

Post-translational modifications for PIR34546 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR34546 Gene

Domains & Families for PIR34546 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR34546 Gene

Function for PIR34546 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR34546 Gene

Localization for PIR34546 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR34546 Gene

Pathways & Interactions for PIR34546 Gene

PathCards logo

SuperPathways for PIR34546 Gene

No Data Available

Interacting Proteins for PIR34546 Gene

Gene Ontology (GO) - Biological Process for PIR34546 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR34546 Gene

Drugs & Compounds for PIR34546 Gene

No Compound Related Data Available

Transcripts for PIR34546 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR34546 Gene

No ASD Table

Relevant External Links for PIR34546 Gene

GeneLoc Exon Structure for
PIR34546

No data available for mRNA/cDNA for PIR34546 Gene

Expression for PIR34546 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR34546 Gene

Orthologs for PIR34546 Gene

No data available for Orthologs and Evolution for PIR34546 Gene

Paralogs for PIR34546 Gene

No data available for Paralogs for PIR34546 Gene

Variants for PIR34546 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR34546 Gene

Disorders for PIR34546 Gene

No disorders were found for PIR34546 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR34546 Gene

Publications for PIR34546 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR34546 Gene

Products for PIR34546 Gene

Sources for PIR34546 Gene

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