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Aliases for PIR34487 Gene

Subcategory (RNA class) for PIR34487 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR34487 Gene

No Aliases found

ORGUL Members for PIR34487 Gene

Previous GeneCards Identifiers for PIR34487 Gene

  • GC05P151189

No data available for External Ids for PIR34487 Gene

Summaries for PIR34487 Gene

GeneCards Summary for PIR34487 Gene

PIR34487 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR34487 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR34487 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR34487 Gene

Genomics for PIR34487 Gene

GeneHancer (GH) Regulatory Elements for PIR34487 Gene

Promoters and enhancers for PIR34487 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J151821 Enhancer 0.8 FANTOM5 0.4 +11.7 11725 0.3 SOX13 FOXA2 ZNF792 SAP130 CEBPG ZNF644 ZNF48 TEAD3 FOXK2 RERE RPLP1P6 GLRA1 PIR59999 PIR34487
GH05J151825 Enhancer 0.6 ENCODE 0.4 +15.9 15905 0.1 CTCF ZNF654 TRIM22 REST RAD21 ZNF335 GATA3 ARID2 IKZF1 ZNF547 RPLP1P6 PIR59999 PIR34487 GLRA1
GH05J151812 Enhancer 0.3 ENCODE 0.7 +2.4 2415 0.2 POLR2A RPLP1P6 PIR34487 PIR59999 G3BP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR34487 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR34487 Gene

Genomic Locations for PIR34487 Gene
chr5:151,809,660-151,809,688
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr5:151,189,221-151,189,249
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR34487 Gene

Genes around PIR34487 on UCSC Golden Path with GeneCards custom track

PIR34487 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR34487 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR34487 Gene

Function for PIR34487 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR34487 Gene

Localization for PIR34487 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR34487 Gene

Pathways & Interactions for PIR34487 Gene

SuperPathways for PIR34487 Gene

No Data Available

Interacting Proteins for PIR34487 Gene

Gene Ontology (GO) - Biological Process for PIR34487 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR34487 Gene

Drugs & Compounds for PIR34487 Gene

No Compound Related Data Available

Transcripts for PIR34487 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR34487 Gene

No ASD Table

Relevant External Links for PIR34487 Gene

GeneLoc Exon Structure for
PIR34487

No data available for mRNA/cDNA for PIR34487 Gene

Expression for PIR34487 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR34487 Gene

Orthologs for PIR34487 Gene

No data available for Orthologs and Evolution for PIR34487 Gene

Paralogs for PIR34487 Gene

No data available for Paralogs for PIR34487 Gene

Variants for PIR34487 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR34487 Gene

Disorders for PIR34487 Gene

No disorders were found for PIR34487 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR34487 Gene

Publications for PIR34487 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR34487 Gene

Sources for PIR34487 Gene

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