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Aliases for PIR33878 Gene

Subcategory (RNA class) for PIR33878 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR33878 Gene

No Aliases found

ORGUL Members for PIR33878 Gene

Previous GeneCards Identifiers for PIR33878 Gene

  • GC10P072637

No data available for External Ids for PIR33878 Gene

Summaries for PIR33878 Gene

GeneCards Summary for PIR33878 Gene

PIR33878 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR33878 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR33878 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR33878 Gene

Genomics for PIR33878 Gene

GeneHancer (GH) Regulatory Elements for PIR33878 Gene

Promoters and enhancers for PIR33878 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J070887 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 +11.0 10997 2.4 HDGF PKNOX1 FOXA2 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 POLR2B PCBD1 SGPL1 PIR33878
GH10J070880 Enhancer 0.8 ENCODE 0.7 +2.9 2865 0.2 HDGF PKNOX1 RB1 ARID4B KLF17 ZNF2 RAD21 CHAMP1 YY1 ARID2 PIR33878 PCBD1 SGPL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR33878 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR33878 Gene

Genomic Locations for PIR33878 Gene
chr10:70,877,354-70,877,382
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr10:72,637,111-72,637,139
(GRCh37/hg19)

Genomic View for PIR33878 Gene

Genes around PIR33878 on UCSC Golden Path with GeneCards custom track

PIR33878 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR33878 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR33878 Gene

Function for PIR33878 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR33878 Gene

Localization for PIR33878 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR33878 Gene

Pathways & Interactions for PIR33878 Gene

SuperPathways for PIR33878 Gene

No Data Available

Interacting Proteins for PIR33878 Gene

Gene Ontology (GO) - Biological Process for PIR33878 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR33878 Gene

Drugs & Compounds for PIR33878 Gene

No Compound Related Data Available

Transcripts for PIR33878 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR33878 Gene

No ASD Table

Relevant External Links for PIR33878 Gene

GeneLoc Exon Structure for
PIR33878

No data available for mRNA/cDNA for PIR33878 Gene

Expression for PIR33878 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR33878 Gene

Orthologs for PIR33878 Gene

No data available for Orthologs and Evolution for PIR33878 Gene

Paralogs for PIR33878 Gene

No data available for Paralogs for PIR33878 Gene

Variants for PIR33878 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR33878 Gene

Disorders for PIR33878 Gene

No disorders were found for PIR33878 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR33878 Gene

Publications for PIR33878 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR33878 Gene

Sources for PIR33878 Gene

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