Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR33852 Gene

Subcategory (RNA class) for PIR33852 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR33852 Gene

No Aliases found

ORGUL Members for PIR33852 Gene

Previous GeneCards Identifiers for PIR33852 Gene

  • GC17M076920

No data available for External Ids for PIR33852 Gene

Summaries for PIR33852 Gene

GeneCards Summary for PIR33852 Gene

PIR33852 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR33852 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR33852 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR33852 Gene

Genomics for PIR33852 Gene

GeneHancer (GH) Regulatory Elements for PIR33852 Gene

Promoters and enhancers for PIR33852 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J078919 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 650.7 +0.9 851 6.7 PKNOX1 ARID4B SIN3A TCF12 GLIS2 KLF7 ATF7 SP3 NCOA1 NFYC PIR33852 TIMP2 ENSG00000267491 CANT1 CEP295NL CYTH1
GH17J078914 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 +6.9 6925 4.8 HDAC1 PKNOX1 SIN3A TCF12 ZNF121 SCRT2 RCOR1 FOS CEBPB REST ENSG00000267491 USP36 CANT1 CYTH1 TIMP2 PIR33852
GH17J078910 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +11.9 11873 4 HDAC1 KLF1 ZFP64 ZNF384 KLF14 ZBTB40 ZNF697 ZNF664 ZNF157 FOXK2 USP36 TNRC6C ENSG00000267491 CEP295NL TIMP2 PIR33852
GH17J078908 Enhancer 0.7 ENCODE dbSUPER 0.4 +15.3 15265 0.6 ZNF121 FOXA2 FOXA3 GLIS1 ENSG00000267491 PIR33852 TIMP2
GH17J078902 Enhancer 0.9 ENCODE dbSUPER 0.3 +20.8 20783 1.2 MXI1 ZBTB21 SIN3A BMI1 ZIC2 RFX5 ZFHX2 GLIS2 POLR2A PATZ1 ENSG00000267491 CEP295NL TMC8 GC17P078899 PIR33852 TIMP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR33852 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR33852 Gene

Genomic Locations for PIR33852 Gene
chr17:78,924,028-78,924,056
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr17:76,920,110-76,920,138
(GRCh37/hg19)
Size:
29 bases
Orientation:
Minus strand

Genomic View for PIR33852 Gene

Genes around PIR33852 on UCSC Golden Path with GeneCards custom track

PIR33852 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR33852 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR33852 Gene

Function for PIR33852 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR33852 Gene

Localization for PIR33852 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR33852 Gene

Pathways & Interactions for PIR33852 Gene

SuperPathways for PIR33852 Gene

No Data Available

Interacting Proteins for PIR33852 Gene

Gene Ontology (GO) - Biological Process for PIR33852 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR33852 Gene

Drugs & Compounds for PIR33852 Gene

No Compound Related Data Available

Transcripts for PIR33852 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR33852 Gene

No ASD Table

Relevant External Links for PIR33852 Gene

GeneLoc Exon Structure for
PIR33852

No data available for mRNA/cDNA for PIR33852 Gene

Expression for PIR33852 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR33852 Gene

Orthologs for PIR33852 Gene

No data available for Orthologs and Evolution for PIR33852 Gene

Paralogs for PIR33852 Gene

No data available for Paralogs for PIR33852 Gene

Variants for PIR33852 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR33852 Gene

Disorders for PIR33852 Gene

No disorders were found for PIR33852 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR33852 Gene

Publications for PIR33852 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR33852 Gene

Sources for PIR33852 Gene

Content
Loading form....