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Aliases for PIR33798 Gene

Subcategory (RNA class) for PIR33798 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR33798 Gene

No Aliases found

ORGUL Members for PIR33798 Gene

Previous GeneCards Identifiers for PIR33798 Gene

  • GC17M039967

No data available for External Ids for PIR33798 Gene

Summaries for PIR33798 Gene

GeneCards Summary for PIR33798 Gene

PIR33798 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR33798 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR33798 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR33798 Gene

Genomics for PIR33798 Gene

GeneHancer (GH) Regulatory Elements for PIR33798 Gene

Promoters and enhancers for PIR33798 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J041810 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 650.7 -1.6 -1610 4.4 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZNF766 ZNF213 ZNF207 ZNF143 P3H4 FKBP10 PIR33798 DHX58 NT5C3B CNTD1 CAVIN1 RETREG3 KAT2A HSD17B1
GH17J041798 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +10.7 10701 3.5 HDGF CLOCK ARID4B SIN3A ZNF2 SLC30A9 ZNF213 ZNF143 DEK PAF1 JUP NT5C3B ENSG00000267758 KLHL11 KLHL10 RETREG3 STAT5A ENSG00000266962 CNP TTC25
GH17J041791 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +17.0 16998 5.1 HDGF PKNOX1 CLOCK FOXA2 ARNT ARID4B NEUROD1 SIN3A ZNF766 FOS JUP NT5C3B KLHL11 KRT15 ENSG00000267632 TUBG2 ACLY KRT19 KRT16 KRT17
GH17J041806 Enhancer 0.8 ENCODE dbSUPER 0.7 +3.9 3929 1.3 ZNF501 PRDM2 NFIC ZNF23 POLR2A ZFP36 MLLT1 ZBTB17 NT5C3B JUP KLHL10 KLHL11 ENSG00000259623 CCR10 GAST PIR33798 P3H4 PIR32942
GH17J041788 Enhancer 0.7 ENCODE dbSUPER 0.3 +22.0 22008 1.4 NFIL3 ZFHX2 HLF CEBPA CEBPG ZKSCAN1 EGR2 PIR32942 NT5C3B PIR33798
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR33798 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR33798 Gene

Genomic Locations for PIR33798 Gene
chr17:41,811,176-41,811,202
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr17:39,967,428-39,967,454
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR33798 Gene

Genes around PIR33798 on UCSC Golden Path with GeneCards custom track

PIR33798 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR33798 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR33798 Gene

Function for PIR33798 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR33798 Gene

Localization for PIR33798 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR33798 Gene

Pathways & Interactions for PIR33798 Gene

SuperPathways for PIR33798 Gene

No Data Available

Interacting Proteins for PIR33798 Gene

Gene Ontology (GO) - Biological Process for PIR33798 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR33798 Gene

Drugs & Compounds for PIR33798 Gene

No Compound Related Data Available

Transcripts for PIR33798 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR33798 Gene

No ASD Table

Relevant External Links for PIR33798 Gene

GeneLoc Exon Structure for
PIR33798

No data available for mRNA/cDNA for PIR33798 Gene

Expression for PIR33798 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR33798 Gene

Orthologs for PIR33798 Gene

No data available for Orthologs and Evolution for PIR33798 Gene

Paralogs for PIR33798 Gene

No data available for Paralogs for PIR33798 Gene

Variants for PIR33798 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR33798 Gene

Disorders for PIR33798 Gene

No disorders were found for PIR33798 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR33798 Gene

Publications for PIR33798 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR33798 Gene

Sources for PIR33798 Gene

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