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Aliases for PIR33777 Gene

Subcategory (RNA class) for PIR33777 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR33777 Gene

No Aliases found

ORGUL Members for PIR33777 Gene

No data available for External Ids for PIR33777 Gene

Summaries for PIR33777 Gene

GeneCards Summary for PIR33777 Gene

PIR33777 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR33777 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR33777 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR33777 Gene

Genomics for PIR33777 Gene

GeneHancer (GH) Regulatory Elements for PIR33777 Gene

Promoters and enhancers for PIR33777 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J000870 Promoter/Enhancer 1.2 Ensembl ENCODE 600.7 +1.5 1463 3 ZNF148 ZNF121 ZBTB7A PATZ1 KLF9 SP2 POLR2A MAZ MYNN MNT PIR33777 CFD MED16 SBNO2
GH19J000874 Enhancer 0.5 ENCODE 600.7 -1.3 -1289 1 ZNF121 POLR2A ZBTB33 KLF1 PIR33777 MED16 CFD PIR50877
GH19J000858 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 +12.1 12125 6.1 HDGF SP1 ZFX ZKSCAN8 MNT ZNF148 NKRF MLLT1 CEBPG GTF2F1 CFD C19orf24 CIRBP GRIN3B MIER2 MED16 PIR33777
GH19J000868 Enhancer 1 Ensembl ENCODE 0.7 +4.2 4228 2.5 HDGF ZNF121 GLIS2 IKZF1 ZIC2 ZNF629 PATZ1 ZNF692 FUS SMARCC1 CIRBP CFD MED16 GRIN3B TMEM259 MIER2 PIR33777
GH19J000867 Enhancer 0.7 FANTOM5 0.4 +6.4 6361 0.4 SP7 ZBTB8A ZNF600 ZIC2 PATZ1 POLR2A FOXM1 PTBP1 ZNF423 ZFHX2 CFD MED16 ODF3L2 ATP5F1D GPX4 TPGS1 CNN2 POLRMT BSG C19orf24
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR33777 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR33777 Gene

Genomic Locations for PIR33777 Gene
chr19:873,535-873,564
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr19:873,535-873,564
(GRCh37/hg19)
Size:
30 bases
Orientation:
Minus strand

Genomic View for PIR33777 Gene

Genes around PIR33777 on UCSC Golden Path with GeneCards custom track

PIR33777 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR33777 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR33777 Gene

Proteins for PIR33777 Gene

Post-translational modifications for PIR33777 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR33777 Gene

Domains & Families for PIR33777 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR33777 Gene

Function for PIR33777 Gene

Phenotypes From GWAS Catalog for PIR33777 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR33777 Gene

Localization for PIR33777 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR33777 Gene

Pathways & Interactions for PIR33777 Gene

PathCards logo

SuperPathways for PIR33777 Gene

No Data Available

Interacting Proteins for PIR33777 Gene

Gene Ontology (GO) - Biological Process for PIR33777 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR33777 Gene

Drugs & Compounds for PIR33777 Gene

No Compound Related Data Available

Transcripts for PIR33777 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR33777 Gene

No ASD Table

Relevant External Links for PIR33777 Gene

GeneLoc Exon Structure for
PIR33777

No data available for mRNA/cDNA for PIR33777 Gene

Expression for PIR33777 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR33777 Gene

Orthologs for PIR33777 Gene

No data available for Orthologs and Evolution for PIR33777 Gene

Paralogs for PIR33777 Gene

No data available for Paralogs for PIR33777 Gene

Variants for PIR33777 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR33777 Gene

Disorders for PIR33777 Gene

No disorders were found for PIR33777 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR33777 Gene

Publications for PIR33777 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR33777 Gene

Products for PIR33777 Gene

Sources for PIR33777 Gene

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