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Aliases for PIR33417 Gene

Subcategory (RNA class) for PIR33417 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR33417 Gene

No Aliases found

ORGUL Members for PIR33417 Gene

Previous GeneCards Identifiers for PIR33417 Gene

  • GC01P016948

No data available for External Ids for PIR33417 Gene

Summaries for PIR33417 Gene

GeneCards Summary for PIR33417 Gene

PIR33417 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR33417 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR33417 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR33417 Gene

Genomics for PIR33417 Gene

GeneHancer (GH) Regulatory Elements for PIR33417 Gene

Promoters and enhancers for PIR33417 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J016620 Enhancer 1.4 Ensembl ENCODE dbSUPER 600.7 +1.4 1396 1.6 HDGF ELF3 CTCF MAFK MYC TFE3 PPARG ZNF644 RAD21 KAT8 PIR33417 ENSG00000237938 SPEN RPL22P3 ENSG00000178715 ARHGEF19 PIR45232 CROCCP2
GH01J016618 Enhancer 0.6 ENCODE dbSUPER 600.7 -0.7 -691 0.2 ZBTB33 CTCF ENSG00000271732 PIR33417 CROCCP2
GH01J016619 Enhancer 0.5 ENCODE dbSUPER 600.7 +0.3 289 0.2 POLR2A PIR33417 PIR45232 CROCCP2
GH01J016623 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.7 +4.9 4856 4.1 ZNF473 HDGF CTCF ZNF121 NFIB IKZF1 MAFK MYC PPARG RAD21 SPEN CROCC RPL22P3 ZBTB17 ARHGEF19 ENSG00000237938 ENSG00000178715 CROCCP3 FBXO42 MFAP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR33417 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR33417 Gene

Genomic Locations for PIR33417 Gene
chr1:16,619,592-16,619,621
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr1:16,946,087-16,946,116
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR33417 Gene

Genes around PIR33417 on UCSC Golden Path with GeneCards custom track

PIR33417 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR33417 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR33417 Gene

Proteins for PIR33417 Gene

Post-translational modifications for PIR33417 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR33417 Gene

Domains & Families for PIR33417 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR33417 Gene

Function for PIR33417 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR33417 Gene

Localization for PIR33417 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR33417 Gene

Pathways & Interactions for PIR33417 Gene

PathCards logo

SuperPathways for PIR33417 Gene

No Data Available

Interacting Proteins for PIR33417 Gene

Gene Ontology (GO) - Biological Process for PIR33417 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR33417 Gene

Drugs & Compounds for PIR33417 Gene

No Compound Related Data Available

Transcripts for PIR33417 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR33417 Gene

No ASD Table

Relevant External Links for PIR33417 Gene

GeneLoc Exon Structure for
PIR33417

No data available for mRNA/cDNA for PIR33417 Gene

Expression for PIR33417 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR33417 Gene

Orthologs for PIR33417 Gene

No data available for Orthologs and Evolution for PIR33417 Gene

Paralogs for PIR33417 Gene

No data available for Paralogs for PIR33417 Gene

Variants for PIR33417 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR33417 Gene

Disorders for PIR33417 Gene

No disorders were found for PIR33417 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR33417 Gene

Publications for PIR33417 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR33417 Gene

Products for PIR33417 Gene

Sources for PIR33417 Gene

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