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Aliases for PIR33397 Gene

Subcategory (RNA class) for PIR33397 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR33397 Gene

No Aliases found

ORGUL Members for PIR33397 Gene

Previous GeneCards Identifiers for PIR33397 Gene

  • GC18M012792

No data available for External Ids for PIR33397 Gene

Summaries for PIR33397 Gene

GeneCards Summary for PIR33397 Gene

PIR33397 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR33397 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR33397 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR33397 Gene

Genomics for PIR33397 Gene

GeneHancer (GH) Regulatory Elements for PIR33397 Gene

Promoters and enhancers for PIR33397 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J028083 Enhancer 1.5 VISTA Ensembl ENCODE dbSUPER 0.2 -80.5 -80471 5 SOX13 FOXA2 CEBPG FEZF1 RAD21 YY1 ZNF335 POLR2A ZNF600 L3MBTL2 CDH2 CHST9 GC18M028093 PIR33397 GC18M028006
GH18J028062 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -58.8 -58833 4.5 CEBPB FEZF1 EP300 SP1 ATF4 JUND PRDM6 ZNF366 FOSL2 FOS CDH2 GC18M028093 PIR33397 GC18M028006
GH18J028045 Enhancer 0.6 Ensembl ENCODE 0.3 -39.7 -39716 1.2 OSR2 BACH1 PIR33397 GC18M028006 GC18M028093 CDH2
GH18J028090 Enhancer 0.8 ENCODE 0.2 -85.2 -85191 1.7 ELF3 FOXA2 MLX ZSCAN9 RAD21 RARA YY1 CREM THAP11 MIXL1 CDH2 GC18M028093 PIR33397 GC18M028006
GH18J028038 Enhancer 0.5 Ensembl ENCODE 0.3 -33.3 -33322 0.9 JUN CDH2 GC18M028006 PIR33397 GC18M028093
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR33397 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR33397 Gene

Genomic Locations for PIR33397 Gene
chr18:28,005,896-28,005,925
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr18:12,792,930-12,792,959
(GRCh37/hg19)
Size:
30 bases
Orientation:
Minus strand

Genomic View for PIR33397 Gene

Genes around PIR33397 on UCSC Golden Path with GeneCards custom track

PIR33397 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR33397 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR33397 Gene

Function for PIR33397 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR33397 Gene

Localization for PIR33397 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR33397 Gene

Pathways & Interactions for PIR33397 Gene

SuperPathways for PIR33397 Gene

No Data Available

Interacting Proteins for PIR33397 Gene

Gene Ontology (GO) - Biological Process for PIR33397 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR33397 Gene

Drugs & Compounds for PIR33397 Gene

No Compound Related Data Available

Transcripts for PIR33397 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR33397 Gene

No ASD Table

Relevant External Links for PIR33397 Gene

GeneLoc Exon Structure for
PIR33397

No data available for mRNA/cDNA for PIR33397 Gene

Expression for PIR33397 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR33397 Gene

Orthologs for PIR33397 Gene

No data available for Orthologs and Evolution for PIR33397 Gene

Paralogs for PIR33397 Gene

No data available for Paralogs for PIR33397 Gene

Variants for PIR33397 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR33397 Gene

Disorders for PIR33397 Gene

No disorders were found for PIR33397 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR33397 Gene

Publications for PIR33397 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR33397 Gene

Sources for PIR33397 Gene

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