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Aliases for PIR33394 Gene

Subcategory (RNA class) for PIR33394 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR33394 Gene

No Aliases found

ORGUL Members for PIR33394 Gene

Previous GeneCards Identifiers for PIR33394 Gene

  • GC11M118005

No data available for External Ids for PIR33394 Gene

Summaries for PIR33394 Gene

GeneCards Summary for PIR33394 Gene

PIR33394 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR33394 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR33394 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR33394 Gene

Genomics for PIR33394 Gene

GeneHancer (GH) Regulatory Elements for PIR33394 Gene

Promoters and enhancers for PIR33394 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J118145 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 -12.1 -12142 0.8 PKNOX1 ATF1 ARID4B SIN3A DMAP1 GLIS2 ZNF207 ZNF143 KLF7 ATF7 SCN4B SCN2B CD3G CD3D CD3E TMPRSS4 TMPRSS13 PIR33394
GH11J118146 Enhancer 0.8 ENCODE 0.4 -11.6 -11599 0.2 HDAC1 ATF1 SIN3A KLF5 RAD21 RCOR1 KLF13 ZHX1 THAP11 ELF1 SCN2B CD3D CD3G CD3E TMPRSS4 TMPRSS13 SCN4B PIR33394
GH11J118126 Enhancer 0.7 ENCODE 0.4 +7.0 6971 0.1 GTF2F1 SMAD1 NFATC3 GTF2E2 TEAD4 BACH1 CDC5L POLR2B ZNF316 MTA3 TMPRSS4 ARCN1 CD3E TMPRSS13 SCN4B PIR33394 LOC105369517
GH11J118110 Enhancer 0.7 dbSUPER 0.3 +22.6 22564 0.8 ESRRA SP5 ASH1L CEBPB MNT SREBF1 ZNF217 ZFHX2 FOXK2 EGR1 SCN4B TMPRSS4 CD3D CD3G IL10RA LOC105369517 PIR33394
GH11J118142 Enhancer 0.5 Ensembl 0.4 -9.3 -9332 0.7 IKZF1 NRF1 CEBPB CEBPG SPI1 SCN2B TMPRSS4 FXYD6 FXYD6-FXYD2 PIR33394 SCN4B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR33394 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR33394 Gene

Genomic Locations for PIR33394 Gene
chr11:118,133,614-118,133,642
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr11:118,004,329-118,004,357
(GRCh37/hg19)
Size:
29 bases
Orientation:
Minus strand

Genomic View for PIR33394 Gene

Genes around PIR33394 on UCSC Golden Path with GeneCards custom track

PIR33394 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR33394 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR33394 Gene

Function for PIR33394 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR33394 Gene

Localization for PIR33394 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR33394 Gene

Pathways & Interactions for PIR33394 Gene

SuperPathways for PIR33394 Gene

No Data Available

Interacting Proteins for PIR33394 Gene

Gene Ontology (GO) - Biological Process for PIR33394 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR33394 Gene

Drugs & Compounds for PIR33394 Gene

No Compound Related Data Available

Transcripts for PIR33394 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR33394 Gene

No ASD Table

Relevant External Links for PIR33394 Gene

GeneLoc Exon Structure for
PIR33394

No data available for mRNA/cDNA for PIR33394 Gene

Expression for PIR33394 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR33394 Gene

Orthologs for PIR33394 Gene

No data available for Orthologs and Evolution for PIR33394 Gene

Paralogs for PIR33394 Gene

No data available for Paralogs for PIR33394 Gene

Variants for PIR33394 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR33394 Gene

Disorders for PIR33394 Gene

No disorders were found for PIR33394 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR33394 Gene

Publications for PIR33394 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR33394 Gene

Sources for PIR33394 Gene

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