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Aliases for PIR31989 Gene

Subcategory (RNA class) for PIR31989 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR31989 Gene

No Aliases found

ORGUL Members for PIR31989 Gene

Previous GeneCards Identifiers for PIR31989 Gene

  • GC04M077808
  • GC04M077812
  • GC04M077821
  • GC04M077826
  • GC04M077834

No data available for External Ids for PIR31989 Gene

Summaries for PIR31989 Gene

GeneCards Summary for PIR31989 Gene

PIR31989 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR31989 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR31989 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR31989 Gene

Genomics for PIR31989 Gene

GeneHancer (GH) Regulatory Elements for PIR31989 Gene

Promoters and enhancers for PIR31989 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J076855 Enhancer 1.1 Ensembl ENCODE 0.3 +28.6 28577 3 ZNF652 ZNF384 SP1 HNF1A PPARG RXRA RFX1 CEBPA GATAD2A RXRB SOWAHB CNOT6L NUP54 RPL7P17 PIR31989 LOC105377289
GH04J076830 Enhancer 1.2 FANTOM5 ENCODE 0.2 +53.9 53851 3.1 ZNF652 ZFX ELF3 POLR2A MAFK ELF1 SP1 HNF1A PPARG PRDM1 SOWAHB ENSG00000224218 LOC105377289 PIR31989
GH04J076801 Promoter/Enhancer 1.4 Ensembl ENCODE 0.2 +82.6 82634 3.5 CBFA2T2 ZSCAN21 TRIM24 SP7 PRDM1 SMARCA4 GLIS2 RXRA RFX1 PRDM10 LOC105377289 ENSG00000224218 SDAD1 NUP54 PIR31989
GH04J076867 Enhancer 0.7 ENCODE 0.4 +17.4 17379 1.3 NFIB RXRA PRDM10 SP1 ZNF316 CTBP1 NFE2 ZNF580 MAFG NFIC SOWAHB PIR31989 LOC105377289
GH04J076851 Enhancer 0.7 Ensembl 0.3 +35.6 35553 0.2 SP1 CEBPA REST CTBP1 CEBPB JUN RCOR1 OSR2 JUND EP300 PIR31989 LOC105377289
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR31989 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR31989 Gene

Genomic Locations for PIR31989 Gene
chr4:76,885,628-76,885,654
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr4:77,806,781-77,806,807
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR31989 Gene

Genes around PIR31989 on UCSC Golden Path with GeneCards custom track

PIR31989 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR31989 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR31989 Gene

Proteins for PIR31989 Gene

Post-translational modifications for PIR31989 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR31989 Gene

Domains & Families for PIR31989 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR31989 Gene

Function for PIR31989 Gene

Phenotypes From GWAS Catalog for PIR31989 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR31989 Gene

Localization for PIR31989 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR31989 Gene

Pathways & Interactions for PIR31989 Gene

PathCards logo

SuperPathways for PIR31989 Gene

No Data Available

Interacting Proteins for PIR31989 Gene

Gene Ontology (GO) - Biological Process for PIR31989 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR31989 Gene

Drugs & Compounds for PIR31989 Gene

No Compound Related Data Available

Transcripts for PIR31989 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR31989 Gene

No ASD Table

Relevant External Links for PIR31989 Gene

GeneLoc Exon Structure for
PIR31989

No data available for mRNA/cDNA for PIR31989 Gene

Expression for PIR31989 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR31989 Gene

Orthologs for PIR31989 Gene

No data available for Orthologs and Evolution for PIR31989 Gene

Paralogs for PIR31989 Gene

No data available for Paralogs for PIR31989 Gene

Variants for PIR31989 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR31989 Gene

Disorders for PIR31989 Gene

No disorders were found for PIR31989 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR31989 Gene

Publications for PIR31989 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR31989 Gene

Products for PIR31989 Gene

Sources for PIR31989 Gene

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