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Aliases for PIR31660 Gene

Subcategory (RNA class) for PIR31660 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR31660 Gene

No Aliases found

ORGUL Members for PIR31660 Gene

Previous GeneCards Identifiers for PIR31660 Gene

  • GC12M050039

No data available for External Ids for PIR31660 Gene

Summaries for PIR31660 Gene

GeneCards Summary for PIR31660 Gene

PIR31660 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR31660 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR31660 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR31660 Gene

Genomics for PIR31660 Gene

GeneHancer (GH) Regulatory Elements for PIR31660 Gene

Promoters and enhancers for PIR31660 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J049643 Enhancer 1 ENCODE dbSUPER 650.7 +1.2 1152 2.1 ELF3 HDGF PKNOX1 RB1 SIN3A ZNF2 RAD21 ARID2 ZNF143 ETV6 PIR31660 TMBIM6 FMNL3 FAM186B RNU6-834P MCRS1 SPATS2 HIGD1AP9 PRPF40B
GH12J049621 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +22.1 22054 3.6 PKNOX1 CLOCK MLX ARID4B SIN3A IRF4 YY1 POLR2B ZNF143 FOS FAM186B PRPF40B FMNL3 RNU6-834P TMBIM6 MCRS1 C1QL4 HIGD1AP9 PIR31660
GH12J049641 Enhancer 1 ENCODE dbSUPER 0.7 +3.3 3269 1.8 ELF3 MLX ARID4B DMAP1 RAD21 ZNF48 RARA SLC30A9 ZNF614 FOS FMNL3 TMBIM6 FAM186B RNU6-834P MCRS1 PIR31660 HIGD1AP9 PRPF40B
GH12J049661 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -18.0 -18012 4.9 HDGF ATF1 PKNOX1 ZNF133 IRF4 ETS1 ZNF121 ZNF766 ATF7 RUNX3 FMNL3 MCRS1 TMBIM6 LOC390314 SMARCD1 LMBR1L KANSL2 DDX23 KMT2D TUBA1C
GH12J049702 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.2 -59.4 -59425 6.1 HDGF PKNOX1 SMAD1 MLX ARNT ARID4B SIN3A ZNF2 YY1 SLC30A9 FMNL3 DDX23 LOC390314 CCNT1 LMBR1L FAM186B KMT2D SMARCD1 LIMA1 ENSG00000257964
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR31660 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR31660 Gene

Genomic Locations for PIR31660 Gene
chr12:49,645,729-49,645,756
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr12:50,039,512-50,039,539
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR31660 Gene

Genes around PIR31660 on UCSC Golden Path with GeneCards custom track

PIR31660 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR31660 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR31660 Gene

Function for PIR31660 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR31660 Gene

Localization for PIR31660 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR31660 Gene

Pathways & Interactions for PIR31660 Gene

SuperPathways for PIR31660 Gene

No Data Available

Interacting Proteins for PIR31660 Gene

Gene Ontology (GO) - Biological Process for PIR31660 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR31660 Gene

Drugs & Compounds for PIR31660 Gene

No Compound Related Data Available

Transcripts for PIR31660 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR31660 Gene

No ASD Table

Relevant External Links for PIR31660 Gene

GeneLoc Exon Structure for
PIR31660

No data available for mRNA/cDNA for PIR31660 Gene

Expression for PIR31660 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR31660 Gene

Orthologs for PIR31660 Gene

No data available for Orthologs and Evolution for PIR31660 Gene

Paralogs for PIR31660 Gene

No data available for Paralogs for PIR31660 Gene

Variants for PIR31660 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR31660 Gene

Disorders for PIR31660 Gene

No disorders were found for PIR31660 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR31660 Gene

Publications for PIR31660 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR31660 Gene

Sources for PIR31660 Gene

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