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Aliases for PIR31643 Gene

Subcategory (RNA class) for PIR31643 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR31643 Gene

No Aliases found

ORGUL Members for PIR31643 Gene

Previous GeneCards Identifiers for PIR31643 Gene

  • GC01P144932

No data available for External Ids for PIR31643 Gene

Summaries for PIR31643 Gene

GeneCards Summary for PIR31643 Gene

PIR31643 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR31643 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR31643 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR31643 Gene

Genomics for PIR31643 Gene

GeneHancer (GH) Regulatory Elements for PIR31643 Gene

Promoters and enhancers for PIR31643 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J148950 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.7 -4.7 -4739 13.5 HDGF ZNF652 CC2D1A ELF3 NKRF POLR2A ZNF121 CEBPG RERE ZNF687 PDE4DIP ENSG00000225871 SF3B4 HIST2H2AB HIST2H2BD PIR33316 PIR31643 ENSG00000254913
GH01J148946 Enhancer 1.1 ENCODE dbSUPER 0.7 +4.3 4332 2.6 SP1 RERE RELA ZNF174 ZNF384 MZF1 IKZF1 POLR2A NFRKB YBX1 PIR31643 RNU2-38P PDE4DIP
GH01J148941 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +9.2 9206 3.7 SP1 SP7 POLR2A YBX1 RFX1 GATAD2B PRDM10 ZEB2 ZNF501 SCRT2 SF3B4 ENSG00000225871 HIST2H2BD NBPF9 RNU2-38P PIR31643 PDE4DIP
GH01J148944 Enhancer 0.7 dbSUPER 0.4 +6.5 6517 1.5 CEBPG SP1 POLR2A ZNF644 ZNF600 PRDM10 CEBPA GATAD2A SOX13 SCRT2 PDE4DIP PIR31643 RNU2-38P
GH01J148939 Enhancer 0.7 Ensembl dbSUPER 0.4 +12.2 12160 1.6 CEBPG NFRKB BRCA1 MNT CEBPB RNU2-38P PIR31643 PDE4DIP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR31643 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR31643 Gene

Genomic Locations for PIR31643 Gene
chr1:148,952,135-148,952,161
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr1:144,932,327-144,932,353
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR31643 Gene

Genes around PIR31643 on UCSC Golden Path with GeneCards custom track

PIR31643 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR31643 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR31643 Gene

Proteins for PIR31643 Gene

Post-translational modifications for PIR31643 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR31643 Gene

Domains & Families for PIR31643 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR31643 Gene

Function for PIR31643 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR31643 Gene

Localization for PIR31643 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR31643 Gene

Pathways & Interactions for PIR31643 Gene

PathCards logo

SuperPathways for PIR31643 Gene

No Data Available

Interacting Proteins for PIR31643 Gene

Gene Ontology (GO) - Biological Process for PIR31643 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR31643 Gene

Drugs & Compounds for PIR31643 Gene

No Compound Related Data Available

Transcripts for PIR31643 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR31643 Gene

No ASD Table

Relevant External Links for PIR31643 Gene

GeneLoc Exon Structure for
PIR31643

No data available for mRNA/cDNA for PIR31643 Gene

Expression for PIR31643 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR31643 Gene

Orthologs for PIR31643 Gene

No data available for Orthologs and Evolution for PIR31643 Gene

Paralogs for PIR31643 Gene

No data available for Paralogs for PIR31643 Gene

Variants for PIR31643 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR31643 Gene

Disorders for PIR31643 Gene

No disorders were found for PIR31643 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR31643 Gene

Publications for PIR31643 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR31643 Gene

Products for PIR31643 Gene

Sources for PIR31643 Gene

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