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Aliases for PIR31427 Gene

Subcategory (RNA class) for PIR31427 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR31427 Gene

No Aliases found

ORGUL Members for PIR31427 Gene

Previous GeneCards Identifiers for PIR31427 Gene

  • GC12M054635

No data available for External Ids for PIR31427 Gene

Summaries for PIR31427 Gene

GeneCards Summary for PIR31427 Gene

PIR31427 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR31427 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR31427 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR31427 Gene

Genomics for PIR31427 Gene

GeneHancer (GH) Regulatory Elements for PIR31427 Gene

Promoters and enhancers for PIR31427 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J054241 Enhancer 0.7 ENCODE 600.7 +0.4 437 0.2 RELA CREM ZBED1 IKZF1 IKZF2 PKNOX1 SCRT2 DPF2 EED NFE2 GC12M054284 PIR62927 PIR31427 PIR43612 GPR84 COPZ1 RNU6-950P MIR148B CBX5
GH12J054240 Enhancer 0.5 Ensembl 600.7 +1.7 1669 0.2 MAFK ZNF316 NFE2 FOXK2 MAFG EMSY GC12M054284 PIR62927 PIR31427 PIR43612 GPR84 COPZ1 RNU6-950P MIR148B CBX5
GH12J054251 Enhancer 0.8 Ensembl ENCODE 0.4 -9.7 -9732 1.4 CTCF ZNF121 RAD21 REST TRIM22 NFE2 SMARCA5 RUNX3 RFX5 SMC3 GPR84 COPZ1 RNU6-950P MIR148B GTSF1 RN7SL390P PIR31427 CBX5
GH12J054245 Enhancer 0.3 Ensembl 0.7 -4.5 -4532 1 ZNF121 GPR84 COPZ1 RNU6-950P MIR148B PIR31427 RN7SL390P CBX5
GH12J054248 Enhancer 0.4 Ensembl ENCODE 0.4 -7.0 -7026 0.8 PIR31427 RN7SL390P CBX5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR31427 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR31427 Gene

Genomic Locations for PIR31427 Gene
chr12:54,241,740-54,241,769
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr12:54,635,524-54,635,553
(GRCh37/hg19)
Size:
30 bases
Orientation:
Minus strand

Genomic View for PIR31427 Gene

Genes around PIR31427 on UCSC Golden Path with GeneCards custom track

PIR31427 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR31427 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR31427 Gene

Proteins for PIR31427 Gene

Post-translational modifications for PIR31427 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR31427 Gene

Domains & Families for PIR31427 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR31427 Gene

Function for PIR31427 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR31427 Gene

Localization for PIR31427 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR31427 Gene

Pathways & Interactions for PIR31427 Gene

PathCards logo

SuperPathways for PIR31427 Gene

No Data Available

Interacting Proteins for PIR31427 Gene

Gene Ontology (GO) - Biological Process for PIR31427 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR31427 Gene

Drugs & Compounds for PIR31427 Gene

No Compound Related Data Available

Transcripts for PIR31427 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR31427 Gene

No ASD Table

Relevant External Links for PIR31427 Gene

GeneLoc Exon Structure for
PIR31427

No data available for mRNA/cDNA for PIR31427 Gene

Expression for PIR31427 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR31427 Gene

Orthologs for PIR31427 Gene

No data available for Orthologs and Evolution for PIR31427 Gene

Paralogs for PIR31427 Gene

No data available for Paralogs for PIR31427 Gene

Variants for PIR31427 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR31427 Gene

Disorders for PIR31427 Gene

No disorders were found for PIR31427 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR31427 Gene

Publications for PIR31427 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR31427 Gene

Products for PIR31427 Gene

Sources for PIR31427 Gene

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