Aliases for PIN4P1 Gene

Aliases for PIN4P1 Gene

  • Peptidylprolyl Cis/Trans Isomerase, NIMA-Interacting 4 Pseudogene 1 2 3 5
  • Protein (Peptidylprolyl Cis/Trans Isomerase) NIMA-Interacting, 4 Pseudogene 1 2 3
  • Protein (Peptidylprolyl Cis/Trans Isomerase) NIMA-Interacting, 4 (Parvulin) Pseudogene 3
  • HCG1789710 3

External Ids for PIN4P1 Gene

Previous GeneCards Identifiers for PIN4P1 Gene

  • GC15M044170

Summaries for PIN4P1 Gene

GeneCards Summary for PIN4P1 Gene

PIN4P1 (Peptidylprolyl Cis/Trans Isomerase, NIMA-Interacting 4 Pseudogene 1) is a Pseudogene.

Additional gene information for PIN4P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PIN4P1 Gene

Genomics for PIN4P1 Gene

GeneHancer (GH) Regulatory Elements for PIN4P1 Gene

Promoters and enhancers for PIN4P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J043876 Enhancer 0.3 dbSUPER 750.6 +0.6 642 1.1 ZFP64 BCL6 PIN4P1 lnc-MFAP1-3 TGM7 ZSCAN29 piR-43104-018 FRMD5
GH15J043879 Enhancer 1.1 VISTA Ensembl ENCODE dbSUPER 0.6 -2.5 -2469 3.2 CTCF ZNF143 ZBTB33 ADAL ENSG00000249839 FRMD5 CATSPER2 PIN4P1 lnc-MFAP1-3 HSALNG0105541
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIN4P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIN4P1 Gene

Genomic Locations for PIN4P1 Gene
chr15:43,875,806-43,878,171
(GRCh38/hg38)
Size:
2,366 bases
Orientation:
Minus strand
chr15:44,168,004-44,170,369
(GRCh37/hg19)
Size:
2,366 bases
Orientation:
Minus strand

Genomic View for PIN4P1 Gene

Genes around PIN4P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PIN4P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIN4P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PIN4P1 Gene

Proteins for PIN4P1 Gene

Post-translational modifications for PIN4P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIN4P1 Gene

Domains & Families for PIN4P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PIN4P1 Gene

Function for PIN4P1 Gene

Phenotypes for PIN4P1 Gene

genes like me logo Genes that share phenotypes with PIN4P1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIN4P1 Gene

Localization for PIN4P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIN4P1 Gene

Pathways & Interactions for PIN4P1 Gene

PathCards logo

SuperPathways for PIN4P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PIN4P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIN4P1 Gene

Drugs & Compounds for PIN4P1 Gene

No Compound Related Data Available

Transcripts for PIN4P1 Gene

mRNA/cDNA for PIN4P1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PIN4P1 Gene

No ASD Table

Relevant External Links for PIN4P1 Gene

GeneLoc Exon Structure for
PIN4P1
ECgene alternative splicing isoforms for
PIN4P1

Expression for PIN4P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PIN4P1 Gene

mRNA differential expression in normal tissues according to GTEx for PIN4P1 Gene

This gene is overexpressed in Heart - Left Ventricle (x4.3) and Brain - Spinal cord (cervical c-1) (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of PIN4P1 Gene:

PIN4P1

SOURCE GeneReport for Unigene cluster for PIN4P1 Gene:

Hs.658099
genes like me logo Genes that share expression patterns with PIN4P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIN4P1 Gene

Orthologs for PIN4P1 Gene

Evolution for PIN4P1 Gene

ENSEMBL:
Gene Tree for PIN4P1 (if available)
TreeFam:
Gene Tree for PIN4P1 (if available)

No data available for Orthologs for PIN4P1 Gene

Paralogs for PIN4P1 Gene

No data available for Paralogs for PIN4P1 Gene

Variants for PIN4P1 Gene

Sequence variations from dbSNP and Humsavar for PIN4P1 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000343228 -- 43,878,857(-) A/G upstream_transcript_variant
rs1001160724 -- 43,878,444(-) TTTT/TTTTT upstream_transcript_variant
rs1001679550 -- 43,875,517(-) G/A downstream_transcript_variant
rs1002110828 -- 43,875,977(-) T/C/G non_coding_transcript_variant
rs1002564333 -- 43,877,169(-) T/C non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for PIN4P1 Gene

Variant ID Type Subtype PubMed ID
nsv1050263 CNV loss 25217958

Additional Variant Information for PIN4P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PIN4P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for PIN4P1 Gene

Disorders for PIN4P1 Gene

Additional Disease Information for PIN4P1

No disorders were found for PIN4P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PIN4P1 Gene

Publications for PIN4P1 Gene

  1. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A … Hentze MW (Cell 2012) 3 56
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 56
  3. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 56

Products for PIN4P1 Gene

Sources for PIN4P1 Gene