Aliases for PIN1P1 Gene

Aliases for PIN1P1 Gene

  • Peptidylprolyl Cis/Trans Isomerase, NIMA-Interacting 1 Pseudogene 1 2 3 5
  • Peptidylprolyl Cis/Trans Isomerase, NIMA-Interacting 1-Like (Pseudogene) 2 3
  • PIN1L 3 4
  • Protein (Peptidylprolyl Cis/Trans Isomerase) NIMA-Interacting 1-Like (Pseudogene) 3
  • Protein (Peptidylprolyl Cis/Trans Isomerase) NIMA-Interacting 1-Like 2
  • Peptidylprolyl Cis-Trans Isomerase NIMA-Interacting 1 Pseudogene 1 4
  • Putative PIN1-Like Protein 4
  • PIN1P1 5

External Ids for PIN1P1 Gene

Previous HGNC Symbols for PIN1P1 Gene

  • PIN1L

Previous GeneCards Identifiers for PIN1P1 Gene

  • GC01P070386

Summaries for PIN1P1 Gene

GeneCards Summary for PIN1P1 Gene

PIN1P1 (Peptidylprolyl Cis/Trans Isomerase, NIMA-Interacting 1 Pseudogene 1) is a Pseudogene.

Additional gene information for PIN1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PIN1P1 Gene

Genomics for PIN1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PIN1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J069919 Promoter 0.6 EPDnew 600.7 +0.0 5 0.1 MGA ZBTB40 ZBTB33 ZFX PIN1P1 lnc-SRSF11-2 LRRC7 piR-61580-031 LRRC40
GH01J069913 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 0.7 -4.8 -4750 2.9 ZNF316 MAFF MAFK MAFG EMSY piR-50444-024 PIN1P1 lnc-SRSF11-2 LRRC40 LRRC7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIN1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PIN1P1 Gene

Genomic Locations for PIN1P1 Gene
chr1:69,919,322-69,920,317
(GRCh38/hg38)
Size:
996 bases
Orientation:
Plus strand
chr1:70,385,005-70,386,000
(GRCh37/hg19)
Size:
996 bases
Orientation:
Plus strand

Genomic View for PIN1P1 Gene

Genes around PIN1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PIN1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIN1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PIN1P1 Gene

Proteins for PIN1P1 Gene

  • Protein details for PIN1P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O15428-PINL_HUMAN
    Recommended name:
    Putative PIN1-like protein
    Protein Accession:
    O15428
    Secondary Accessions:
    • B2RBW1
    • Q5VW75

    Protein attributes for PIN1P1 Gene

    Size:
    100 amino acids
    Molecular mass:
    11021 Da
    Quaternary structure:
    No Data Available

neXtProt entry for PIN1P1 Gene

Post-translational modifications for PIN1P1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for PIN1P1 Gene

Domains & Families for PIN1P1 Gene

Protein Domains for PIN1P1 Gene

InterPro:
Blocks:
  • WW domain signature
ProtoNet:

Suggested Antigen Peptide Sequences for PIN1P1 Gene

GenScript: Design optimal peptide antigens:
  • Peptidylprolyl cis-trans isomerase NIMA-interacting 1 pseudogene 1 (PINL_HUMAN)
genes like me logo Genes that share domains with PIN1P1: view

No data available for Gene Families , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PIN1P1 Gene

Function for PIN1P1 Gene

genes like me logo Genes that share phenotypes with PIN1P1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIN1P1 Gene

Localization for PIN1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIN1P1 Gene

Pathways & Interactions for PIN1P1 Gene

PathCards logo

SuperPathways for PIN1P1 Gene

No Data Available

Interacting Proteins for PIN1P1 Gene

Selected Interacting proteins: O15428-PINL_HUMAN for PIN1P1 Gene via MINT IID

Symbol External ID(s) Details
MAPT

Gene Ontology (GO) - Biological Process for PIN1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIN1P1 Gene

Drugs & Compounds for PIN1P1 Gene

No Compound Related Data Available

Transcripts for PIN1P1 Gene

mRNA/cDNA for PIN1P1 Gene

2 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for PIN1P1 Gene

No ASD Table

Relevant External Links for PIN1P1 Gene

GeneLoc Exon Structure for
PIN1P1

Expression for PIN1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PIN1P1 Gene

mRNA differential expression in normal tissues according to GTEx for PIN1P1 Gene

This gene is overexpressed in Testis (x32.3).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for PIN1P1

SOURCE GeneReport for Unigene cluster for PIN1P1 Gene:

Hs.654711
genes like me logo Genes that share expression patterns with PIN1P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIN1P1 Gene

Orthologs for PIN1P1 Gene

Evolution for PIN1P1 Gene

ENSEMBL:
Gene Tree for PIN1P1 (if available)
TreeFam:
Gene Tree for PIN1P1 (if available)

No data available for Orthologs for PIN1P1 Gene

Paralogs for PIN1P1 Gene

(5) SIMAP similar genes for PIN1P1 Gene using alignment to 1 proteins:

  • PINL_HUMAN
genes like me logo Genes that share paralogs with PIN1P1: view

No data available for Paralogs for PIN1P1 Gene

Variants for PIN1P1 Gene

Structural Variations from Database of Genomic Variants (DGV) for PIN1P1 Gene

Variant ID Type Subtype PubMed ID
esv3586345 CNV loss 21293372
esv3586346 CNV gain 21293372

Additional Variant Information for PIN1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PIN1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for PIN1P1 Gene

Disorders for PIN1P1 Gene

Additional Disease Information for PIN1P1

No disorders were found for PIN1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PIN1P1 Gene

Publications for PIN1P1 Gene

  1. The human PIN1 peptidyl-prolyl cis/trans isomerase gene maps to human chromosome 19p13 and the closely related PIN1L gene to 1p31. (PMID: 9299231) Campbell HD … Young IG (Genomics 1997) 2 3 4 23
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 3 4
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 4

Products for PIN1P1 Gene

Sources for PIN1P1 Gene