Aliases for PIGUP1 Gene

Aliases for PIGUP1 Gene

  • Phosphatidylinositol Glycan Anchor Biosynthesis Class U Pseudogene 1 2 3 5

External Ids for PIGUP1 Gene

Previous GeneCards Identifiers for PIGUP1 Gene

  • GC09M073533

Summaries for PIGUP1 Gene

GeneCards Summary for PIGUP1 Gene

PIGUP1 (Phosphatidylinositol Glycan Anchor Biosynthesis Class U Pseudogene 1) is a Pseudogene.

Additional gene information for PIGUP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PIGUP1 Gene

Genomics for PIGUP1 Gene

GeneHancer (GH) Regulatory Elements for PIGUP1 Gene

Promoters and enhancers for PIGUP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J070920 Enhancer 0.6 Ensembl ENCODE 0.7 -3.9 -3915 0.9 ZNF316 NFE2 NFE2L2 MAFK BACH1 PIGUP1 hsa-miR-5095-505 TRPM3
GH09J070868 Promoter/Enhancer 1.2 EPDnew Ensembl ENCODE 0.3 +49.2 49207 2.6 TRIM28 ZNF341 JUND ZNF335 SCRT1 EZH2 CBX8 SCRT2 TRPM3 MIR204 lnc-KLF9-4 PIGUP1
GH09J070924 Enhancer 0.6 ENCODE 0.4 -7.2 -7166 1.3 CTCF FOS CUX1 RAD21 SMC3 ZBTB17 EZH2 PKNOX1 ZNF654 GATA2 TRPM3 PIGUP1 hsa-miR-5095-505
GH09J070902 Enhancer 0.7 Ensembl ENCODE 0.4 +15.2 15157 2.7 JUND FOS EZH2 STAT3 FOXP2 GATA2 SMARCA4 JUN BHLHE40 KLF1 TRPM3 PIGUP1 lnc-KLF9-4
GH09J070953 Enhancer 0.9 FANTOM5 Ensembl ENCODE 0.3 -36.9 -36893 3.6 JUND TEAD4 ZNF843 GLIS1 ATF2 ZNF449 SP7 TRPM3 hsa-miR-5095-505 PIGUP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIGUP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIGUP1 Gene

Genomic Locations for PIGUP1 Gene
chr9:70,916,766-70,917,508
(GRCh38/hg38)
Size:
743 bases
Orientation:
Minus strand
chr9:73,531,682-73,532,424
(GRCh37/hg19)
Size:
743 bases
Orientation:
Minus strand

Genomic View for PIGUP1 Gene

Genes around PIGUP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PIGUP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIGUP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PIGUP1 Gene

Proteins for PIGUP1 Gene

Post-translational modifications for PIGUP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIGUP1 Gene

Domains & Families for PIGUP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PIGUP1 Gene

Function for PIGUP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIGUP1 Gene

Localization for PIGUP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIGUP1 Gene

Pathways & Interactions for PIGUP1 Gene

PathCards logo

SuperPathways for PIGUP1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for PIGUP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PIGUP1 Gene

Drugs & Compounds for PIGUP1 Gene

No Compound Related Data Available

Transcripts for PIGUP1 Gene

mRNA/cDNA for PIGUP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PIGUP1 Gene

No ASD Table

Relevant External Links for PIGUP1 Gene

GeneLoc Exon Structure for
PIGUP1

Expression for PIGUP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PIGUP1 Gene

genes like me logo Genes that share expression patterns with PIGUP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIGUP1 Gene

Orthologs for PIGUP1 Gene

Evolution for PIGUP1 Gene

ENSEMBL:
Gene Tree for PIGUP1 (if available)
TreeFam:
Gene Tree for PIGUP1 (if available)

No data available for Orthologs for PIGUP1 Gene

Paralogs for PIGUP1 Gene

No data available for Paralogs for PIGUP1 Gene

Variants for PIGUP1 Gene

Additional Variant Information for PIGUP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PIGUP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PIGUP1 Gene

Disorders for PIGUP1 Gene

No disorders were found for PIGUP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIGUP1 Gene

Publications for PIGUP1 Gene

No publications were found for PIGUP1 Gene.

No data available for Mastermind for PIGUP1 Gene

Products for PIGUP1 Gene

Sources for PIGUP1 Gene