Aliases for PIGPP4 Gene

Aliases for PIGPP4 Gene

  • Phosphatidylinositol Glycan Anchor Biosynthesis Class P Pseudogene 4 2 3 5

External Ids for PIGPP4 Gene

Summaries for PIGPP4 Gene

GeneCards Summary for PIGPP4 Gene

PIGPP4 (Phosphatidylinositol Glycan Anchor Biosynthesis Class P Pseudogene 4) is a Pseudogene.

Additional gene information for PIGPP4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PIGPP4 Gene

Genomics for PIGPP4 Gene

GeneHancer (GH) Regulatory Elements for PIGPP4 Gene

Promoters and enhancers for PIGPP4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J009878 Enhancer 0.8 dbSUPER 500.7 +1.6 1643 1.2 ZBTB40 GTF2E2 CTBP1 HINFP RBM25 NFRKB RELA NEUROD1 ZNF316 ZKSCAN1 PIGPP4 lnc-PPP4R1-16 lnc-TXNDC2-8 TWSG1
GH18J009884 Promoter/Enhancer 1.4 EPDnew Ensembl dbSUPER 0.7 -4.5 -4513 2 GTF2E2 PHB2 ZBTB11 MYC HINFP NCOR1 NFRKB RELA ARNT FOSL1 TXNDC2 ENSG00000272799 PIGPP4 lnc-PPP4R1-16
GH18J009881 Enhancer 0.5 dbSUPER 0.7 -2.0 -2016 1.8 ZBTB11 ZNF395 ZNF589 TFDP1 KLF1 ZFX IKZF1 ZNF83 CBX3 ENSG00000272799 PIGPP4 TXNDC2 lnc-PPP4R1-16
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIGPP4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIGPP4 Gene

Genomic Locations for PIGPP4 Gene
chr18:9,880,580-9,880,886
(GRCh38/hg38)
Size:
307 bases
Orientation:
Minus strand
chr18:9,880,577-9,880,883
(GRCh37/hg19)
Size:
307 bases
Orientation:
Minus strand

Genomic View for PIGPP4 Gene

Genes around PIGPP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PIGPP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIGPP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PIGPP4 Gene

Proteins for PIGPP4 Gene

Post-translational modifications for PIGPP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIGPP4 Gene

Domains & Families for PIGPP4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PIGPP4 Gene

Function for PIGPP4 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIGPP4 Gene

Localization for PIGPP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIGPP4 Gene

Pathways & Interactions for PIGPP4 Gene

PathCards logo

SuperPathways for PIGPP4 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for PIGPP4 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PIGPP4 Gene

Drugs & Compounds for PIGPP4 Gene

No Compound Related Data Available

Transcripts for PIGPP4 Gene

mRNA/cDNA for PIGPP4 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PIGPP4 Gene

No ASD Table

Relevant External Links for PIGPP4 Gene

GeneLoc Exon Structure for
PIGPP4

Expression for PIGPP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PIGPP4 Gene

genes like me logo Genes that share expression patterns with PIGPP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIGPP4 Gene

Orthologs for PIGPP4 Gene

Evolution for PIGPP4 Gene

ENSEMBL:
Gene Tree for PIGPP4 (if available)
TreeFam:
Gene Tree for PIGPP4 (if available)

No data available for Orthologs for PIGPP4 Gene

Paralogs for PIGPP4 Gene

No data available for Paralogs for PIGPP4 Gene

Variants for PIGPP4 Gene

Additional Variant Information for PIGPP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PIGPP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PIGPP4 Gene

Disorders for PIGPP4 Gene

No disorders were found for PIGPP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIGPP4 Gene

Publications for PIGPP4 Gene

No publications were found for PIGPP4 Gene.

No data available for Mastermind for PIGPP4 Gene

Products for PIGPP4 Gene

Sources for PIGPP4 Gene