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Aliases for PIGFP1 Gene

Aliases for PIGFP1 Gene

  • Phosphatidylinositol Glycan Anchor Biosynthesis Class F Pseudogene 1 2 3 5
  • Phosphatidylinositol Glycan Anchor Biosynthesis, Class F Pseudogene 3
  • Phosphatidylinositol Glycan, Class F, Pseudogene 1 3

External Ids for PIGFP1 Gene

Previous GeneCards Identifiers for PIGFP1 Gene

  • GC05U990043
  • GC05P178417
  • GC05P178462
  • GC05P178281
  • GC05P178349

Summaries for PIGFP1 Gene

GeneCards Summary for PIGFP1 Gene

PIGFP1 (Phosphatidylinositol Glycan Anchor Biosynthesis Class F Pseudogene 1) is a Pseudogene.

Additional gene information for PIGFP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PIGFP1 Gene

Genomics for PIGFP1 Gene

GeneHancer (GH) Regulatory Elements for PIGFP1 Gene

Promoters and enhancers for PIGFP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J178921 Promoter 0.5 EPDnew 650.7 0.0 -5 0.1 ZFP2 PIGFP1 GC05P178923 ENSG00000254035 GRM6 ZNF879 CLK4 LOC100422593
GH05J178940 Promoter/Enhancer 1 Ensembl ENCODE 5.4 +19.0 19042 1.9 POLR2A ZNF143 ZFX ETS1 ENSG00000272431 GC05M178937 ZNF454 PIR37938 PIGFP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIGFP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIGFP1 Gene

Genomic Locations for PIGFP1 Gene
chr5:178,922,020-178,922,914
(GRCh38/hg38)
Size:
895 bases
Orientation:
Plus strand
chr5:178,349,021-178,349,915
(GRCh37/hg19)
Size:
895 bases
Orientation:
Plus strand

Genomic View for PIGFP1 Gene

Genes around PIGFP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PIGFP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIGFP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PIGFP1 Gene

Function for PIGFP1 Gene

Molecular function for PIGFP1 Gene

GENATLAS Biochemistry:
glycosyl-phosphatidylinositol (GPI) anchor synthesis,class F,pseudogene

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIGFP1 Gene

Localization for PIGFP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIGFP1 Gene

Pathways & Interactions for PIGFP1 Gene

SuperPathways for PIGFP1 Gene

No Data Available

Interacting Proteins for PIGFP1 Gene

Gene Ontology (GO) - Biological Process for PIGFP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIGFP1 Gene

Drugs & Compounds for PIGFP1 Gene

No Compound Related Data Available

Transcripts for PIGFP1 Gene

mRNA/cDNA for PIGFP1 Gene

(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PIGFP1 Gene

No ASD Table

Relevant External Links for PIGFP1 Gene

GeneLoc Exon Structure for
PIGFP1
ECgene alternative splicing isoforms for
PIGFP1

Expression for PIGFP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PIGFP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of PIGFP1 Gene:

PIGFP1
genes like me logo Genes that share expression patterns with PIGFP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIGFP1 Gene

Orthologs for PIGFP1 Gene

Evolution for PIGFP1 Gene

ENSEMBL:
Gene Tree for PIGFP1 (if available)
TreeFam:
Gene Tree for PIGFP1 (if available)

No data available for Orthologs for PIGFP1 Gene

Paralogs for PIGFP1 Gene

No data available for Paralogs for PIGFP1 Gene

Variants for PIGFP1 Gene

Additional Variant Information for PIGFP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PIGFP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PIGFP1 Gene

Disorders for PIGFP1 Gene

No disorders were found for PIGFP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIGFP1 Gene

Publications for PIGFP1 Gene

  1. Structure and chromosomal localization of the GPI-anchor synthesis gene PIGF and its pseudogene psi PIGF. (PMID: 8575782) Ohishi K … Kinoshita T (Genomics 1995) 2 3 58

Products for PIGFP1 Gene

Sources for PIGFP1 Gene

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