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Aliases for PIGCP1 Gene

Aliases for PIGCP1 Gene

  • Phosphatidylinositol Glycan Anchor Biosynthesis Class C Pseudogene 1 2 3 5
  • Phosphatidylinositol Glycan Anchor Biosynthesis, Class C Pseudogene 3
  • Phosphatidylinositol Glycan, Class C, Pseudogene 1 3

External Ids for PIGCP1 Gene

Previous GeneCards Identifiers for PIGCP1 Gene

  • GC11U990106
  • GC11M033136
  • GC11M033061
  • GC11M033054

Summaries for PIGCP1 Gene

GeneCards Summary for PIGCP1 Gene

PIGCP1 (Phosphatidylinositol Glycan Anchor Biosynthesis Class C Pseudogene 1) is a Pseudogene.

Additional gene information for PIGCP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PIGCP1 Gene

Genomics for PIGCP1 Gene

GeneHancer (GH) Regulatory Elements for PIGCP1 Gene

Promoters and enhancers for PIGCP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J033038 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 18.2 +36.9 36917 4 SP1 ELF3 CC2D1A ZFX MNT SIX5 NKRF MLLT1 ZNF121 CDC5L TCP11L1 PIGCP1 LINC00294 GC11M032953
GH11J033015 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 11.6 +59.5 59484 4.1 ZNF652 ZFX ELF3 MNT CBFA2T2 MLLT1 ZNF121 CEBPG RERE GTF2F1 DEPDC7 LOC105376615 PIGCP1 TCP11L1 GC11M032953
GH11J033059 Enhancer 1.1 Ensembl ENCODE 14.6 +13.8 13799 6.2 CC2D1A CTCF AHR MAFK RELA SP1 CREM MLLT1 RAD21 ZBED1 TCP11L1 PIGCP1 LINC00294 GC11M032953
GH11J033043 Enhancer 0.8 ENCODE 13.9 +31.8 31818 3.6 TRIM24 PPARG ZBTB8A ZNF600 RXRB KLF7 ZNF629 BRCA1 CEBPB CHD2 TCP11L1 PIGCP1 DEPDC7 LINC00294 GC11M032953
GH11J033159 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 5.1 -83.7 -83686 5.2 SP1 CC2D1A ZFX ELF3 ZKSCAN8 NKRF POLR2A MLLT1 RERE GTF2F1 HIPK3 CSTF3 CSTF3-DT NAT10 QSER1 TCP11L1 EIF3M CAPRIN1 PIGCP1 DEPDC7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIGCP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIGCP1 Gene

Genomic Locations for PIGCP1 Gene
chr11:33,075,086-33,076,718
(GRCh38/hg38)
Size:
1,633 bases
Orientation:
Minus strand
chr11:33,096,632-33,098,264
(GRCh37/hg19)
Size:
1,633 bases
Orientation:
Minus strand

Genomic View for PIGCP1 Gene

Genes around PIGCP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PIGCP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIGCP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PIGCP1 Gene

Proteins for PIGCP1 Gene

Post-translational modifications for PIGCP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIGCP1 Gene

Domains & Families for PIGCP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIGCP1 Gene

Function for PIGCP1 Gene

Phenotypes From GWAS Catalog for PIGCP1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIGCP1 Gene

Localization for PIGCP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIGCP1 Gene

Pathways & Interactions for PIGCP1 Gene

PathCards logo

SuperPathways for PIGCP1 Gene

No Data Available

Interacting Proteins for PIGCP1 Gene

Gene Ontology (GO) - Biological Process for PIGCP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIGCP1 Gene

Drugs & Compounds for PIGCP1 Gene

No Compound Related Data Available

Transcripts for PIGCP1 Gene

mRNA/cDNA for PIGCP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for PIGCP1 Gene

No ASD Table

Relevant External Links for PIGCP1 Gene

GeneLoc Exon Structure for
PIGCP1
ECgene alternative splicing isoforms for
PIGCP1

Expression for PIGCP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PIGCP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of PIGCP1 Gene:

PIGCP1
genes like me logo Genes that share expression patterns with PIGCP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIGCP1 Gene

Orthologs for PIGCP1 Gene

Evolution for PIGCP1 Gene

ENSEMBL:
Gene Tree for PIGCP1 (if available)
TreeFam:
Gene Tree for PIGCP1 (if available)

No data available for Orthologs for PIGCP1 Gene

Paralogs for PIGCP1 Gene

No data available for Paralogs for PIGCP1 Gene

Variants for PIGCP1 Gene

Additional Variant Information for PIGCP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PIGCP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PIGCP1 Gene

Disorders for PIGCP1 Gene

No disorders were found for PIGCP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIGCP1 Gene

Publications for PIGCP1 Gene

  1. Structures and chromosomal localizations of the glycosylphosphatidylinositol synthesis gene PIGC and its pseudogene PIGCP1. (PMID: 9325057) Hong Y … Kinoshita T (Genomics 1997) 2 3 58

Products for PIGCP1 Gene

Sources for PIGCP1 Gene

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