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Aliases for PI4KAP1 Gene
Aliases for PI4KAP1 Gene
External Ids for PI4KAP1 Gene
- HGNC: 33576
- Entrez Gene: 728233
- Ensembl: ENSG00000274602
- UniProtKB: Q8N8J0
Previous GeneCards Identifiers for PI4KAP1 Gene
- GC22M018764
- GC22M020383
- GC22P004815
Summaries for PI4KAP1 Gene
GeneCards Summary for PI4KAP1 Gene
PI4KAP1 (Phosphatidylinositol 4-Kinase Alpha Pseudogene 1) is a Pseudogene.
Additional gene information for PI4KAP1 Gene
- HGNC(33576)
- Entrez Gene(728233)
- Ensembl(ENSG00000274602)
- UniProtKB(Q8N8J0)
- Open Targets Platform(ENSG00000274602)
- Search for PI4KAP1 at DataMed
- Search for PI4KAP1 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PI4KAP1 Gene
Genomics for PI4KAP1 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for PI4KAP1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH22J018572 | Promoter | 0.8 | Ensembl | 0.7 | +2.2 | 2167 | 6.4 | ARHGAP35 MTA2 YBX3 NKRF POLR2A EGR1 HDGF GATAD2A TRIM25 DPF2 | UFD1 PI4KAP1 lnc-GGTLC3-4 piR-57460-432 RIMBP3 TMEM191B | |
| GH22J018571 | Promoter | 0.3 | Ensembl | 0.4 | +7.5 | 7467 | 0.2 | piR-57460-432 PI4KAP1 lnc-GGTLC3-4 lnc-TMEM191B-5 RIMBP3 TMEM191B | ||
| GH22J018570 | Promoter | 0.3 | Ensembl | 0.4 | +6.7 | 6667 | 0.2 | PI4KAP1 piR-57460-432 lnc-GGTLC3-4 RIMBP3 TMEM191B | ||
| GH22J018573 | Promoter | 0.3 | Ensembl | 0.4 | +7.1 | 7067 | 0.2 | PI4KAP1 piR-57460-432 lnc-GGTLC3-4 RIMBP3 TMEM191B | ||
| GH22J018557 | Promoter | 0.3 | Ensembl | 0.4 | +19.8 | 19767 | 0.4 | piR-57460-432 lnc-TMEM191B-5 lnc-GGTLC3-4 PI4KAP1 TMEM191B RIMBP3 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around PI4KAP1 on the GeneHancer Hub at the UCSC Golden Path
- Top Transcription factor binding sites by QIAGEN in the PI4KAP1 gene promoter:
-
- AML1a
- E47
- Hand1
- Hlf
- HTF
- MZF-1
- NF-1
- NF-1/L
- RORalpha1
- RP58
Genomic Locations for PI4KAP1 Gene
Genomic Locations for PI4KAP1 Gene
- chr22:18,533,646-18,577,968
- (GRCh38/hg38)
- Size:
- 44,323 bases
- Orientation:
- Minus strand
- chr22:20,383,524-20,427,835
- (GRCh37/hg19)
- Size:
- 44,312 bases
- Orientation:
- Minus strand
Genomic View for PI4KAP1 Gene
Genes around PI4KAP1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 22q11.21 by HGNC
- 22q11.21 by Entrez Gene
- 22q11.21 by Ensembl
PI4KAP1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for PI4KAP1 Gene
Proteins for PI4KAP1 Gene
-
Protein details for PI4KAP1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q8N8J0-PI4P1_HUMAN
- Recommended name:
- Putative inactive phosphatidylinositol 4-kinase alpha-like protein P1
- Protein Accession:
- Q8N8J0
Protein attributes for PI4KAP1 Gene
- Size:
- 262 amino acids
- Molecular mass:
- 29179 Da
- Quaternary structure:
- No Data Available
Post-translational modifications for PI4KAP1 Gene
No Post-translational modifications
Antibody Products
- antibodies-online: Show 4 available PI4KAP1 Antibodies ranked by validation data
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for PI4KAP1
- Origene Custom Protein Services for PI4KAP1
No data available for DME Specific Peptides for PI4KAP1 Gene
Domains & Families for PI4KAP1 Gene
Suggested Antigen Peptide Sequences for PI4KAP1 Gene
- GenScript: Design optimal peptide antigens:
-
- Putative phosphatidylinositol 4-kinase alpha-like protein P1 (PI4P1_HUMAN)
Graphical View of Domain Structure for InterPro Entry
Q8N8J0- Family:
-
- Belongs to the PI3/PI4-kinase family. Type III PI4K subfamily.
No data available for Gene Families for PI4KAP1 Gene
Function for PI4KAP1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0004430 | 1-phosphatidylinositol 4-kinase activity | IBA | 21873635 |
| GO:0052742 | phosphatidylinositol kinase activity | IBA | 21873635 |
Phenotypes for PI4KAP1 Gene
- GenomeRNAi human phenotypes for PI4KAP1:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for PI4KAP1 - Select products 50% OFF >
- * PI4KAP1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for PI4KAP1
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for PI4KAP1 - Select products 50% OFF >
- * PI4KAP1 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PI4KAP1 Gene
Localization for PI4KAP1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005737 | cytoplasm | IBA | 21873635 |
| GO:0005886 | plasma membrane | IBA | 21873635 |
| GO:0016020 | membrane | IBA | 21873635 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for PI4KAP1 Gene
Pathways & Interactions for PI4KAP1 Gene
Interacting Proteins for PI4KAP1 Gene
| Symbol | External ID(s) | Details |
|---|---|---|
| PI4KA |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0046854 | phosphatidylinositol phosphorylation | IBA | 21873635 |
| GO:0048015 | phosphatidylinositol-mediated signaling | IBA | 21873635 |
No data available for Pathways by source and SIGNOR curated interactions for PI4KAP1 Gene
Transcripts for PI4KAP1 Gene
mRNA/cDNA for PI4KAP1 Gene
- 6 NCBI additional mRNA sequence :
- 9 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000610959 2425 nts (view in UCSC)
- ENST00000611748 1906 nts (view in UCSC)
- ENST00000612500 1869 nts (view in UCSC)
- ENST00000612579 1703 nts (view in UCSC)
- ENST00000616531 560 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for PI4KAP1 - Select products 50% OFF >
- * PI4KAP1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for PI4KAP1
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for PI4KAP1 - Select products 50% OFF >
- * PI4KAP1 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
Relevant External Links for PI4KAP1 Gene
- GeneLoc Exon Structure for
- PI4KAP1
Expression for PI4KAP1 Gene
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for PI4KAP1
SOURCE GeneReport for Unigene cluster for PI4KAP1 Gene:
Hs.592456Primer Products
-
OriGene qPCR primer pairs for PI4KAP1
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PI4KAP1 Gene
Orthologs for PI4KAP1 Gene
No data available for Orthologs for PI4KAP1 Gene
Paralogs for PI4KAP1 Gene
(3) SIMAP similar genes for PI4KAP1 Gene using alignment to 1 proteins:
- PI4P1_HUMAN
No data available for Paralogs for PI4KAP1 Gene
Variants for PI4KAP1 Gene
Additional Variant Information for PI4KAP1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- PI4KAP1
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for PI4KAP1 Gene
Disorders for PI4KAP1 Gene
Additional Disease Information for PI4KAP1
No disorders were found for PI4KAP1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PI4KAP1 Gene
Publications for PI4KAP1 Gene
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4
- Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3
- Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3
ExternalLinks
Products for PI4KAP1 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for PI4KAP1
- Origene Custom Protein Services for PI4KAP1
- Browse OriGene Inhibitory RNA Products For PI4KAP1
- OriGene qPCR primer pairs for PI4KAP1
- Browse CRISPR knockouts for PI4KAP1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For PI4KAP1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- antibodies-online: Show 4 available PI4KAP1 Antibodies ranked by validation data
- antibodies-online: Search results for available PI4KAP1 related products ranked by validation data
- antibodies-online: Search results for available PI4KAP1 related products ranked by validation data
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for PI4KAP1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for PI4KAP1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for PI4KAP1
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for PI4KAP1
Sources for PI4KAP1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB