Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PHF5EP Gene

Aliases for PHF5EP Gene

  • PHD Finger Protein 5E Pseudogene 2 3
  • AC139451.1 5

External Ids for PHF5EP Gene

Previous GeneCards Identifiers for PHF5EP Gene

  • GC03P049788

Summaries for PHF5EP Gene

GeneCards Summary for PHF5EP Gene

PHF5EP (PHD Finger Protein 5E Pseudogene) is a Pseudogene.

Additional gene information for PHF5EP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PHF5EP Gene

Genomics for PHF5EP Gene

GeneHancer (GH) Regulatory Elements for PHF5EP Gene

Promoters and enhancers for PHF5EP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I049721 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 11.8 -51.2 -51183 4.2 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 YY1 POLR2B E2F8 ZNF143 GC03M049731 GC03M049732 GC03P049723 GMPPB PIR51040 PIR59970 FAM212A AMT PHF5EP IP6K1
GH03I049686 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 11.1 -86.9 -86908 4.2 HDGF PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B MST1 PIR39139 RNF123 AMT RBM6 QRICH1 CDHR4 AMIGO3 GMPPB IMPDH2
GH03I049868 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 11.3 +94.1 94140 2 MXI1 USF1 ZNF777 BACH1 ZIC2 BCL11B HIC1 ZNF335 GLIS2 POLR2A CAMKV RBM6 ENSG00000230698 ENSG00000228008 MST1R IP6K1 PHF5EP RN7SL217P GC03P049762 GC03P049763
GH03I050192 Enhancer 1.2 Ensembl ENCODE 9.9 +419.2 419166 4.3 PKNOX1 FOXA2 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF143 FOS HYAL3 RBM6 GNAI2 SEMA3F SEMA3F-AS1 SEMA3B SEMA3B-AS1 LSMEM2 HYAL1 IFRD2
GH03I049747 Enhancer 0.7 ENCODE 12.4 -26.9 -26858 1.9 SOX5 GATAD2A SAP130 TEAD1 JUN HLF CEBPG HMG20A ZNF644 ZKSCAN1 FAM212A PHF5EP IP6K1 GMPPB AMIGO3 RNF123 BSN-AS1 BSN BSN-AS2 COX6CP14
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PHF5EP on UCSC Golden Path with GeneCards custom track

Genomic Locations for PHF5EP Gene

Genomic Locations for PHF5EP Gene
chr3:49,775,256-49,776,184
(GRCh38/hg38)
Size:
929 bases
Orientation:
Plus strand
chr3:49,812,689-49,813,509
(GRCh37/hg19)

Genomic View for PHF5EP Gene

Genes around PHF5EP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PHF5EP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PHF5EP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PHF5EP Gene

Proteins for PHF5EP Gene

Post-translational modifications for PHF5EP Gene

No Post-translational modifications

No data available for DME Specific Peptides for PHF5EP Gene

Domains & Families for PHF5EP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PHF5EP Gene

Function for PHF5EP Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PHF5EP Gene

Localization for PHF5EP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PHF5EP Gene

Pathways & Interactions for PHF5EP Gene

SuperPathways for PHF5EP Gene

No Data Available

Interacting Proteins for PHF5EP Gene

Gene Ontology (GO) - Biological Process for PHF5EP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PHF5EP Gene

Drugs & Compounds for PHF5EP Gene

No Compound Related Data Available

Transcripts for PHF5EP Gene

mRNA/cDNA for PHF5EP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for PHF5EP Gene

No ASD Table

Relevant External Links for PHF5EP Gene

GeneLoc Exon Structure for
PHF5EP
ECgene alternative splicing isoforms for
PHF5EP

Expression for PHF5EP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PHF5EP Gene

NURSA nuclear receptor signaling pathways regulating expression of PHF5EP Gene:

PHF5EP
genes like me logo Genes that share expression patterns with PHF5EP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PHF5EP Gene

Orthologs for PHF5EP Gene

Evolution for PHF5EP Gene

ENSEMBL:
Gene Tree for PHF5EP (if available)
TreeFam:
Gene Tree for PHF5EP (if available)

No data available for Orthologs for PHF5EP Gene

Paralogs for PHF5EP Gene

No data available for Paralogs for PHF5EP Gene

Variants for PHF5EP Gene

Additional Variant Information for PHF5EP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PHF5EP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PHF5EP Gene

Disorders for PHF5EP Gene

No disorders were found for PHF5EP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PHF5EP Gene

Publications for PHF5EP Gene

  1. Identification and characterization of a novel murine multigene family containing a PHD-finger-like motif. (PMID: 12054543) Trappe R … Engel W (Biochemical and biophysical research communications 2002) 3 58

Products for PHF5EP Gene

Sources for PHF5EP Gene

Content
Loading form....