Aliases for PHEX-AS1 Gene

Subcategory (RNA class) for PHEX-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for PHEX-AS1 Gene

  • PHEX Antisense RNA 1 2 3 5
  • PHEX Antisense RNA 1 (Non-Protein Coding) 2 3
  • PHEX-AS1 2 168
  • HSALNG0136974 167
  • NONHSAG054147 92

External Ids for PHEX-AS1 Gene

Previous GeneCards Identifiers for PHEX-AS1 Gene

  • GC00U933239

Summaries for PHEX-AS1 Gene

GeneCards Summary for PHEX-AS1 Gene

PHEX-AS1 (PHEX Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for PHEX-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PHEX-AS1 Gene

Genomics for PHEX-AS1 Gene

GeneHancer (GH) Regulatory Elements for PHEX-AS1 Gene

Promoters and enhancers for PHEX-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ022171 Enhancer 0.2 Ensembl 500.7 +1.3 1283 0.2 PHEX-AS1 RF01061-188 piR-50437-683 PHEX
GH0XJ022133 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 12.9 +37.1 37072 4.2 ZNF217 CTCF TCF12 JUND FOS CLOCK ZNF623 TRIM28 REST RFX1 lnc-SMPX-6 piR-33804-174 PHEX-AS1 PHEX piR-50437-683
GH0XJ022126 Enhancer 0.4 Ensembl dbSUPER 12.6 +46.4 46383 0.4 FOS PHEX-AS1 piR-33804-174 lnc-SMPX-6 piR-61945-526 PHEX
GH0XJ022129 Enhancer 0.3 Ensembl 12.5 +43.2 43183 1.2 STAT3 PHEX-AS1 piR-33804-174 lnc-SMPX-6 piR-61945-526 PHEX
GH0XJ022127 Enhancer 0.2 Ensembl 12.5 +45.1 45083 0.2 PHEX-AS1 piR-33804-174 lnc-SMPX-6 piR-61945-526 PHEX
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PHEX-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PHEX-AS1 Gene

Genomic Locations for PHEX-AS1 Gene
chrX:22,162,732-22,172,984
(GRCh38/hg38)
Size:
10,253 bases
Orientation:
Minus strand
chrX:22,180,850-22,191,100
(GRCh37/hg19)
Size:
10,251 bases
Orientation:
Minus strand

Genomic View for PHEX-AS1 Gene

Genes around PHEX-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PHEX-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PHEX-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PHEX-AS1 Gene

Proteins for PHEX-AS1 Gene

Post-translational modifications for PHEX-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PHEX-AS1 Gene

Domains & Families for PHEX-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PHEX-AS1 Gene

Function for PHEX-AS1 Gene

Phenotypes From GWAS Catalog for PHEX-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PHEX-AS1 Gene

Localization for PHEX-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PHEX-AS1 Gene

Pathways & Interactions for PHEX-AS1 Gene

PathCards logo

SuperPathways for PHEX-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for PHEX-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PHEX-AS1 Gene

Drugs & Compounds for PHEX-AS1 Gene

No Compound Related Data Available

Transcripts for PHEX-AS1 Gene

mRNA/cDNA for PHEX-AS1 Gene

4 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :
2 LNCipedia transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for PHEX-AS1 Gene

No ASD Table

Relevant External Links for PHEX-AS1 Gene

GeneLoc Exon Structure for
PHEX-AS1

Expression for PHEX-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PHEX-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for PHEX-AS1 Gene

This gene is overexpressed in Brain - Cerebellum (x9.2), Brain - Cerebellar Hemisphere (x9.1), Brain - Putamen (basal ganglia) (x5.0), and Brain - Caudate (basal ganglia) (x4.7).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for PHEX-AS1

SOURCE GeneReport for Unigene cluster for PHEX-AS1 Gene:

Hs.633194
genes like me logo Genes that share expression patterns with PHEX-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PHEX-AS1 Gene

Orthologs for PHEX-AS1 Gene

Evolution for PHEX-AS1 Gene

ENSEMBL:
Gene Tree for PHEX-AS1 (if available)
TreeFam:
Gene Tree for PHEX-AS1 (if available)

No data available for Orthologs for PHEX-AS1 Gene

Paralogs for PHEX-AS1 Gene

No data available for Paralogs for PHEX-AS1 Gene

Variants for PHEX-AS1 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for PHEX-AS1 Gene

SNP ID Clinical significance and condition Chr 0X pos Variation AA Info Type
713929 Benign: not provided 22,168,344(-) A/G SYNONYMOUS_VARIANT
803758 Pathogenic: Familial X-linked hypophosphatemic vitamin D refractory rickets 22,168,328(-) CA/C FRAMESHIFT_VARIANT
rs1064793228 Pathogenic/Likely Pathogenic: not provided 22,168,390(-) G/A SPLICE_DONOR_VARIANT
rs1269067103 Pathogenic: Familial X-linked hypophosphatemic vitamin D refractory rickets 22,168,394(-) G/C INTRON_VARIANT
rs375593493 Pathogenic/Likely Pathogenic: Familial X-linked hypophosphatemic vitamin D refractory rickets 22,168,313(-) C/A MISSENSE_VARIANT

Additional dbSNP identifiers (rs#s) for PHEX-AS1 Gene

Additional Variant Information for PHEX-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PHEX-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PHEX-AS1 Gene

Disorders for PHEX-AS1 Gene

Additional Disease Information for PHEX-AS1

No disorders were found for PHEX-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PHEX-AS1 Gene

Publications for PHEX-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54

Products for PHEX-AS1 Gene

Sources for PHEX-AS1 Gene