Aliases for PHBP19 Gene

Aliases for PHBP19 Gene

  • Prohibitin Pseudogene 19 2 3 5

External Ids for PHBP19 Gene

Summaries for PHBP19 Gene

GeneCards Summary for PHBP19 Gene

PHBP19 (Prohibitin Pseudogene 19) is a Pseudogene.

Additional gene information for PHBP19 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PHBP19 Gene

Genomics for PHBP19 Gene

GeneHancer (GH) Regulatory Elements for PHBP19 Gene

Promoters and enhancers for PHBP19 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J051126 Enhancer 0.3 Ensembl ENCODE 750.6 -1.6 -1617 1.6 PHBP19 POU6F1 CSRNP2 LETMD1 DAZAP2 RNU6-1273P SLC11A2 BIN2 ENSG00000200953 TFCP2
GH12J051317 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 4.8 -197.7 -197703 10.3 SP1 ZBTB40 SMARCE1 POLR2A ZNF217 HCFC1 MYC CC2D1A ETV6 ELF1 BIN2 LOC105369767 lnc-CELA1-1 CELA1 HNRNPA3P10 POU6F1 DAZAP2 SMAGP SLC11A2 PHBP19
GH12J050921 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 4.7 +199.7 199684 7.4 ZBTB40 LCORL MLX RBPJ NR2F1 NR2F6 ZNF362 NFYC ETV6 L3MBTL2 METTL7A SLC11A2 LETMD1 TFCP2 ENSG00000257298 LIMA1 SMARCD1 HNRNPA3P10 RNU6-1273P FAM186A
GH12J051315 Enhancer 0.2 dbSUPER 4.2 -191.1 -191093 2.3 piR-35674-102 CELA1 DAZAP2 RNU6-1273P SLC11A2 BIN2 PHBP19 lnc-DAZAP2-6
GH12J051128 Enhancer 0.5 Ensembl 0.6 -3.6 -3617 1.2 SP7 SCRT2 ZFHX2 ZNF335 PRDM6 ZNF558 CSRNP2 POU6F1 DAZAP2 RNU6-1273P SLC11A2 LETMD1 CELA1 BIN2 PHBP19 ENSG00000200953
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PHBP19 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PHBP19 Gene

Genomic Locations for PHBP19 Gene
chr12:51,124,109-51,125,384
(GRCh38/hg38)
Size:
1,276 bases
Orientation:
Minus strand
chr12:51,517,892-51,519,167
(GRCh37/hg19)
Size:
1,276 bases
Orientation:
Minus strand

Genomic View for PHBP19 Gene

Genes around PHBP19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PHBP19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PHBP19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PHBP19 Gene

Proteins for PHBP19 Gene

Post-translational modifications for PHBP19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PHBP19 Gene

Domains & Families for PHBP19 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PHBP19 Gene

Function for PHBP19 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PHBP19 Gene

Localization for PHBP19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PHBP19 Gene

Pathways & Interactions for PHBP19 Gene

PathCards logo

SuperPathways for PHBP19 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PHBP19 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PHBP19 Gene

Drugs & Compounds for PHBP19 Gene

No Compound Related Data Available

Transcripts for PHBP19 Gene

mRNA/cDNA for PHBP19 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for PHBP19 Gene

No ASD Table

Relevant External Links for PHBP19 Gene

GeneLoc Exon Structure for
PHBP19
ECgene alternative splicing isoforms for
PHBP19

Expression for PHBP19 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PHBP19 Gene

NURSA nuclear receptor signaling pathways regulating expression of PHBP19 Gene:

PHBP19
genes like me logo Genes that share expression patterns with PHBP19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PHBP19 Gene

Orthologs for PHBP19 Gene

Evolution for PHBP19 Gene

ENSEMBL:
Gene Tree for PHBP19 (if available)
TreeFam:
Gene Tree for PHBP19 (if available)

No data available for Orthologs for PHBP19 Gene

Paralogs for PHBP19 Gene

No data available for Paralogs for PHBP19 Gene

Variants for PHBP19 Gene

Additional Variant Information for PHBP19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PHBP19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PHBP19 Gene

Disorders for PHBP19 Gene

Additional Disease Information for PHBP19

No disorders were found for PHBP19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PHBP19 Gene

Publications for PHBP19 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 56

No data available for External Links for PHBP19 Gene

Products for PHBP19 Gene

Sources for PHBP19 Gene