PHBP17 Gene (Pseudogene)

Prohibitin Pseudogene 17

GC11M123341
GIFtS:
4
See more...

Aliases for PHBP17 Gene

Aliases for PHBP17 Gene

  • Prohibitin Pseudogene 17 2 3 5
  • PHBP17 5

External Ids for PHBP17 Gene

Previous GeneCards Identifiers for PHBP17 Gene

  • GC00U936247

Summaries for PHBP17 Gene

GeneCards Summary for PHBP17 Gene

PHBP17 (Prohibitin Pseudogene 17) is a Pseudogene.

Additional gene information for PHBP17 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PHBP17 Gene

Genomics for PHBP17 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for PHBP17 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J123331 Enhancer 0.5 Ensembl ENCODE 0.4 +9.5 9513 0.4 FOXA1 ZNF18 PHBP17 lnc-CLMP-4 LINC02727 GRAMD1B CLMP
GH11J123351 Enhancer 0.6 Ensembl ENCODE 0.4 -10.8 -10787 1 POLR2A SMARCA4 TAF1 GRAMD1B PHBP17 lnc-CLMP-4 CLMP
GH11J123328 Enhancer 0.3 Ensembl 0.4 +12.0 12013 0.6 SPI1 ZNF664 LINC02727 PHBP17 lnc-CLMP-4 GRAMD1B CLMP
GH11J123316 Enhancer 0.4 ENCODE 0.4 +24.5 24476 0 EED RUNX3 FOS LINC02727 PHBP17 lnc-CLMP-4 GRAMD1B CLMP
GH11J123335 Enhancer 0.3 ENCODE 0.4 +5.6 5586 0.2 ZNF544 PHBP17 lnc-CLMP-4 LINC02727 GRAMD1B CLMP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PHBP17 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PHBP17 Gene

Genomic Locations for PHBP17 Gene
chr11:123,340,174-123,340,714
(GRCh38/hg38)
Size:
541 bases
Orientation:
Minus strand
chr11:123,210,882-123,211,422
(GRCh37/hg19)
Size:
541 bases
Orientation:
Minus strand

Genomic View for PHBP17 Gene

Genes around PHBP17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PHBP17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PHBP17 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for PHBP17 Gene

Proteins for PHBP17 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for PHBP17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PHBP17 Gene

Domains & Families for PHBP17 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PHBP17 Gene

Function for PHBP17 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for PHBP17 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PHBP17 Gene

Localization for PHBP17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PHBP17 Gene

Pathways & Interactions for PHBP17 Gene

PathCards logo

SuperPathways for PHBP17 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PHBP17 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PHBP17 Gene

Drugs & Compounds for PHBP17 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for PHBP17 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for PHBP17 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PHBP17 Gene

No ASD Table

Relevant External Links for PHBP17 Gene

GeneLoc Exon Structure for
PHBP17

Expression for PHBP17 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PHBP17 Gene

Orthologs for PHBP17 Gene

Evolution for PHBP17 Gene

ENSEMBL:
Gene Tree for PHBP17 (if available)
TreeFam:
Gene Tree for PHBP17 (if available)

No data available for Orthologs for PHBP17 Gene

Paralogs for PHBP17 Gene

No data available for Paralogs for PHBP17 Gene

Variants for PHBP17 Gene

Additional Variant Information for PHBP17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PHBP17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PHBP17 Gene

Disorders for PHBP17 Gene

No disorders were found for PHBP17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PHBP17 Gene

Publications for PHBP17 Gene

No publications were found for PHBP17 Gene.

No data available for Mastermind for PHBP17 Gene

Products for PHBP17 Gene

Sources for PHBP17 Gene