Aliases for PGK1P1 Gene

Aliases for PGK1P1 Gene

  • Phosphoglycerate Kinase 1 Pseudogene 1 2 3

External Ids for PGK1P1 Gene

Previous GeneCards Identifiers for PGK1P1 Gene

  • GC0XU990181
  • GC0XM066156
  • GC0XM067072
  • GC0XM067206
  • GC0XM067289

Summaries for PGK1P1 Gene

GeneCards Summary for PGK1P1 Gene

PGK1P1 (Phosphoglycerate Kinase 1 Pseudogene 1) is a Pseudogene.

Additional gene information for PGK1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PGK1P1 Gene

Genomics for PGK1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PGK1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ068071 Enhancer 0.2 FANTOM5 600.7 +0.4 389 0.4 ENSG00000228328 PGK1P1 RF00994-1187 OPHN1 AR
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PGK1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PGK1P1 Gene

Genomic Locations for PGK1P1 Gene
chrX:68,070,077-68,071,850
(GRCh38/hg38)
Size:
1,774 bases
Orientation:
Minus strand
chrX:67,289,920-67,291,692
(GRCh37/hg19)
Size:
1,773 bases
Orientation:
Minus strand

Genomic View for PGK1P1 Gene

Genes around PGK1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PGK1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PGK1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PGK1P1 Gene

Proteins for PGK1P1 Gene

Post-translational modifications for PGK1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PGK1P1 Gene

Domains & Families for PGK1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PGK1P1 Gene

Function for PGK1P1 Gene

Molecular function for PGK1P1 Gene

GENATLAS Biochemistry:
phosphoglycerate kinase 1,pseudogene 1

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PGK1P1 Gene

Localization for PGK1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PGK1P1 Gene

Pathways & Interactions for PGK1P1 Gene

PathCards logo

SuperPathways for PGK1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PGK1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PGK1P1 Gene

Drugs & Compounds for PGK1P1 Gene

No Compound Related Data Available

Transcripts for PGK1P1 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for PGK1P1 Gene

No ASD Table

Relevant External Links for PGK1P1 Gene

GeneLoc Exon Structure for
PGK1P1

No data available for mRNA/cDNA for PGK1P1 Gene

Expression for PGK1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PGK1P1 Gene

mRNA differential expression in normal tissues according to GTEx for PGK1P1 Gene

This gene is overexpressed in Prostate (x4.6).
genes like me logo Genes that share expression patterns with PGK1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PGK1P1 Gene

Orthologs for PGK1P1 Gene

No data available for Orthologs and Evolution for PGK1P1 Gene

Paralogs for PGK1P1 Gene

No data available for Paralogs for PGK1P1 Gene

Variants for PGK1P1 Gene

Additional Variant Information for PGK1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PGK1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PGK1P1 Gene

Disorders for PGK1P1 Gene

No disorders were found for PGK1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PGK1P1 Gene

Publications for PGK1P1 Gene

  1. Transcriptomic Profiling in Human Decidua of Severe Preeclampsia Detected by RNA Sequencing. (PMID: 28618048) Tong J … Zhang C (Journal of cellular biochemistry 2018) 2 3
  2. Dinucleotide repeat polymorphism at the PGK1P1 locus. (PMID: 1549504) Browne DL … Litt M (Nucleic acids research 1992) 2 3
  3. Dinucleotide repeat polymorphism at the DXYS1X locus. (PMID: 1840656) Browne DL … Litt M (Nucleic acids research 1991) 3
  4. The human phosphoglycerate kinase multigene family. HLA-associated sequences and an X-linked locus containing a processed pseudogene and its functional counterpart. (PMID: 2987238) Michelson AM … Orkin SH (The Journal of biological chemistry 1985) 3

Products for PGK1P1 Gene

Sources for PGK1P1 Gene