Aliases for PGGT1BP1 Gene

Aliases for PGGT1BP1 Gene

  • Protein Geranylgeranyltransferase Type I Subunit Beta Pseudogene 1 2 3 5
  • Protein Geranylgeranyltransferase Type I, Beta Subunit Pseudogene 1 3
  • PGGT1BP1 5

External Ids for PGGT1BP1 Gene

Previous GeneCards Identifiers for PGGT1BP1 Gene

  • GC10M052488

Summaries for PGGT1BP1 Gene

GeneCards Summary for PGGT1BP1 Gene

PGGT1BP1 (Protein Geranylgeranyltransferase Type I Subunit Beta Pseudogene 1) is a Pseudogene.

Additional gene information for PGGT1BP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PGGT1BP1 Gene

Genomics for PGGT1BP1 Gene

Genomic Locations for PGGT1BP1 Gene

Genomic Locations for PGGT1BP1 Gene
chr10:50,726,645-50,727,993
(GRCh38/hg38)
Size:
1,349 bases
Orientation:
Minus strand
chr10:52,486,705-52,487,729
(GRCh37/hg19)
Size:
1,025 bases
Orientation:
Minus strand

Genomic View for PGGT1BP1 Gene

Genes around PGGT1BP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PGGT1BP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PGGT1BP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PGGT1BP1 Gene

No data available for GeneHancer (GH) Regulatory Elements for PGGT1BP1 Gene

Proteins for PGGT1BP1 Gene

Post-translational modifications for PGGT1BP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PGGT1BP1 Gene

Domains & Families for PGGT1BP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PGGT1BP1 Gene

Function for PGGT1BP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PGGT1BP1 Gene

Localization for PGGT1BP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PGGT1BP1 Gene

Pathways & Interactions for PGGT1BP1 Gene

PathCards logo

SuperPathways for PGGT1BP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PGGT1BP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PGGT1BP1 Gene

Drugs & Compounds for PGGT1BP1 Gene

No Compound Related Data Available

Transcripts for PGGT1BP1 Gene

mRNA/cDNA for PGGT1BP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PGGT1BP1 Gene

No ASD Table

Relevant External Links for PGGT1BP1 Gene

GeneLoc Exon Structure for
PGGT1BP1

Expression for PGGT1BP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PGGT1BP1 Gene

genes like me logo Genes that share expression patterns with PGGT1BP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PGGT1BP1 Gene

Orthologs for PGGT1BP1 Gene

Evolution for PGGT1BP1 Gene

ENSEMBL:
Gene Tree for PGGT1BP1 (if available)
TreeFam:
Gene Tree for PGGT1BP1 (if available)

No data available for Orthologs for PGGT1BP1 Gene

Paralogs for PGGT1BP1 Gene

No data available for Paralogs for PGGT1BP1 Gene

Variants for PGGT1BP1 Gene

Additional Variant Information for PGGT1BP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PGGT1BP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PGGT1BP1 Gene

Disorders for PGGT1BP1 Gene

No disorders were found for PGGT1BP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PGGT1BP1 Gene

Publications for PGGT1BP1 Gene

No publications were found for PGGT1BP1 Gene.

No data available for Mastermind for PGGT1BP1 Gene

Products for PGGT1BP1 Gene

Sources for PGGT1BP1 Gene