Aliases for PGBD4P8 Gene

Aliases for PGBD4P8 Gene

  • PiggyBac Transposable Element Derived 4 Pseudogene 8 2 3 5
  • PGBD4P8 5

External Ids for PGBD4P8 Gene

Previous GeneCards Identifiers for PGBD4P8 Gene

  • GC01P060565

Summaries for PGBD4P8 Gene

GeneCards Summary for PGBD4P8 Gene

PGBD4P8 (PiggyBac Transposable Element Derived 4 Pseudogene 8) is a Pseudogene.

Additional gene information for PGBD4P8 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PGBD4P8 Gene

Genomics for PGBD4P8 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PGBD4P8 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J060074 Promoter/Enhancer 1.2 EPDnew Ensembl ENCODE 0.3 -23.6 -23609 0.8 SIN3A KLF7 SP2 TAF1 RFX1 KLF1 KLF10 SP3 POLR2A C1orf87 PGBD4P8 lnc-HOOK1-8 NFIA
GH01J060090 Enhancer 0.3 Ensembl 0.4 -5.9 -5909 1.4 JUND GATA2 PGBD4P8 C1orf87 NFIA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PGBD4P8 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PGBD4P8 Gene

Latest Assembly
chr1:60,097,410-60,098,195
(GRCh38/hg38)
Size:
786 bases
Orientation:
Plus strand

Previous Assembly
chr1:60,563,082-60,563,867
(GRCh37/hg19 by Entrez Gene)
Size:
786 bases
Orientation:
Plus strand

chr1:60,563,087-60,563,648
(GRCh37/hg19 by Ensembl)
Size:
562 bases
Orientation:
Plus strand

Genomic View for PGBD4P8 Gene

Genes around PGBD4P8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PGBD4P8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PGBD4P8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PGBD4P8 Gene

Proteins for PGBD4P8 Gene

Post-translational modifications for PGBD4P8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PGBD4P8 Gene

Domains & Families for PGBD4P8 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PGBD4P8 Gene

Function for PGBD4P8 Gene

Phenotypes From GWAS Catalog for PGBD4P8 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PGBD4P8 Gene

Localization for PGBD4P8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PGBD4P8 Gene

Pathways & Interactions for PGBD4P8 Gene

PathCards logo

SuperPathways for PGBD4P8 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PGBD4P8 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PGBD4P8 Gene

Drugs & Compounds for PGBD4P8 Gene

No Compound Related Data Available

Transcripts for PGBD4P8 Gene

mRNA/cDNA for PGBD4P8 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PGBD4P8 Gene

No ASD Table

Relevant External Links for PGBD4P8 Gene

GeneLoc Exon Structure for
PGBD4P8

Expression for PGBD4P8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PGBD4P8 Gene

mRNA differential expression in normal tissues according to GTEx for PGBD4P8 Gene

This gene is overexpressed in Testis (x19.2), Breast - Mammary Tissue (x8.3), Spleen (x5.3), Artery - Aorta (x5.3), and Artery - Coronary (x5.0).
genes like me logo Genes that share expression patterns with PGBD4P8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PGBD4P8 Gene

Orthologs for PGBD4P8 Gene

Evolution for PGBD4P8 Gene

ENSEMBL:
Gene Tree for PGBD4P8 (if available)
TreeFam:
Gene Tree for PGBD4P8 (if available)

No data available for Orthologs for PGBD4P8 Gene

Paralogs for PGBD4P8 Gene

No data available for Paralogs for PGBD4P8 Gene

Variants for PGBD4P8 Gene

Additional Variant Information for PGBD4P8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PGBD4P8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PGBD4P8 Gene

Disorders for PGBD4P8 Gene

No disorders were found for PGBD4P8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PGBD4P8 Gene

Publications for PGBD4P8 Gene

No publications were found for PGBD4P8 Gene.

No data available for Mastermind for PGBD4P8 Gene

Products for PGBD4P8 Gene

Sources for PGBD4P8 Gene