Aliases for PGBD4P7 Gene

Aliases for PGBD4P7 Gene

  • PiggyBac Transposable Element Derived 4 Pseudogene 7 2 3

External Ids for PGBD4P7 Gene

Previous GeneCards Identifiers for PGBD4P7 Gene

  • GC01M095140

Summaries for PGBD4P7 Gene

GeneCards Summary for PGBD4P7 Gene

PGBD4P7 (PiggyBac Transposable Element Derived 4 Pseudogene 7) is a Pseudogene.

Additional gene information for PGBD4P7 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PGBD4P7 Gene

Genomics for PGBD4P7 Gene

GeneHancer (GH) Regulatory Elements for PGBD4P7 Gene

Promoters and enhancers for PGBD4P7 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J094671 Enhancer 0.7 Ensembl ENCODE 750.6 +0.7 675 3 ZBTB17 FOS CREB1 ZNF366 PLRG1 ZNF280C PGBD4P7 CNN3 RWDD3 F3 piR-60246-007 SLC44A3-AS1
GH01J094675 Enhancer 0.7 Ensembl ENCODE 0.6 -3.0 -2998 4.1 USF2 MAFK ZBTB17 USF1 FOS NR2F2 ZNF366 PLRG1 ZNF280C lnc-SLC44A3-2 F3 CNN3 RWDD3 SLC44A3 SLC44A3-AS1 PGBD4P7
GH01J094660 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +12.5 12468 3 HLF POU5F1 CEBPB USF1 FOXA2 BACH1 NANOG RWDD3 piR-60246-007 PGBD4P7 SLC44A3-AS1
GH01J094668 Enhancer 0.7 Ensembl ENCODE 0.4 +6.4 6368 4 POU5F1 RFX1 NRF1 NFE2 SOX6 MAFG FOXA2 NFE2L2 NANOG EMSY PGBD4P7 piR-60246-007 SLC44A3-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PGBD4P7 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PGBD4P7 Gene

Genomic Locations for PGBD4P7 Gene
chr1:94,672,921-94,674,169
(GRCh38/hg38)
Size:
1,249 bases
Orientation:
Minus strand
chr1:95,138,474-95,139,725
(GRCh37/hg19)
Size:
1,252 bases
Orientation:
Minus strand

Genomic View for PGBD4P7 Gene

Genes around PGBD4P7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PGBD4P7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PGBD4P7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PGBD4P7 Gene

Proteins for PGBD4P7 Gene

Post-translational modifications for PGBD4P7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PGBD4P7 Gene

Domains & Families for PGBD4P7 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PGBD4P7 Gene

Function for PGBD4P7 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PGBD4P7 Gene

Localization for PGBD4P7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PGBD4P7 Gene

Pathways & Interactions for PGBD4P7 Gene

PathCards logo

SuperPathways for PGBD4P7 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PGBD4P7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PGBD4P7 Gene

Drugs & Compounds for PGBD4P7 Gene

No Compound Related Data Available

Transcripts for PGBD4P7 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PGBD4P7 Gene

No ASD Table

Relevant External Links for PGBD4P7 Gene

GeneLoc Exon Structure for
PGBD4P7
ECgene alternative splicing isoforms for
PGBD4P7

No data available for mRNA/cDNA for PGBD4P7 Gene

Expression for PGBD4P7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PGBD4P7 Gene

mRNA differential expression in normal tissues according to GTEx for PGBD4P7 Gene

This gene is overexpressed in Colon - Transverse (x5.8).

NURSA nuclear receptor signaling pathways regulating expression of PGBD4P7 Gene:

PGBD4P7
genes like me logo Genes that share expression patterns with PGBD4P7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PGBD4P7 Gene

Orthologs for PGBD4P7 Gene

No data available for Orthologs and Evolution for PGBD4P7 Gene

Paralogs for PGBD4P7 Gene

No data available for Paralogs for PGBD4P7 Gene

Variants for PGBD4P7 Gene

Additional Variant Information for PGBD4P7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PGBD4P7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PGBD4P7 Gene

Disorders for PGBD4P7 Gene

No disorders were found for PGBD4P7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PGBD4P7 Gene

Publications for PGBD4P7 Gene

No publications were found for PGBD4P7 Gene.

Products for PGBD4P7 Gene

Sources for PGBD4P7 Gene