Aliases for PGAM1P8 Gene

Aliases for PGAM1P8 Gene

  • Phosphoglycerate Mutase 1 Pseudogene 8 2 3 5
  • Phosphoglycerate Mutase 1 (Brain) Pseudogene 3
  • PGAM1P8 5

External Ids for PGAM1P8 Gene

Previous GeneCards Identifiers for PGAM1P8 Gene

  • GC00U933545
  • GC11M064945
  • GC11M065175

Summaries for PGAM1P8 Gene

GeneCards Summary for PGAM1P8 Gene

PGAM1P8 (Phosphoglycerate Mutase 1 Pseudogene 8) is a Pseudogene.

Additional gene information for PGAM1P8 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PGAM1P8 Gene

Genomics for PGAM1P8 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PGAM1P8 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J065174 Enhancer 0.9 Ensembl ENCODE 250.7 +1.8 1822 1 MNT ZNF217 FOXA2 NBN SIN3A NKRF SUPT5H FOXA1 FOXK2 EHMT2 PGAM1P8 SLC22A20P SPDYC CAPN1
GH11J065129 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 12.1 +43.2 43197 7.2 CHD2 TBP ZBTB10 SP1 MXD4 SIX5 NR2C1 MNT IKZF1 BRCA1 SYVN1 lnc-FAU-1 lnc-MRPL49-1 piR-49970 SPDYC PCNX3 SF1 POLA2 EIF1AD ZFPL1
GH11J065288 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.9 -119.3 -119327 14.5 CHD2 MXD4 CEBPA IKZF1 BRCA1 KDM6A THAP11 CEBPB SIN3A FOXA2 CDC42EP2 POLA2 EHD1 LOC728975 SLC25A45 DPF2 FRMD8 ENSG00000255478 SPDYC PGAM1P8
GH11J065211 Promoter/Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.8 -36.6 -36569 3.1 IKZF1 POLR2A ZIC2 SIN3A MYC MAX TAF1 ZNF148 GLIS1 SP1 lnc-CAPN1-1 SLC22A20P LOC728975 POLA2 CAPN1 PGAM1P8 CDC42EP2 SPDYC ZFPL1 CDCA5
GH11J065215 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 11.7 -38.9 -38931 0.8 ZNF658 ZFP91 TARDBP HDAC2 ZNF24 PKNOX1 ZBTB33 NFATC1 EGR1 HNRNPL SLC22A20P POLA2 LOC728975 CAPN1 PGAM1P8 CDC42EP2 SPDYC ENSG00000255173 ZNHIT2 HIGD1AP10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PGAM1P8 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PGAM1P8 Gene

Latest Assembly
chr11:65,174,117-65,176,470
(GRCh38/hg38)
Size:
2,354 bases
Orientation:
Minus strand

Previous Assembly
chr11:64,941,599-64,942,962
(GRCh37/hg19 by Entrez Gene)
Size:
1,364 bases
Orientation:
Minus strand

chr11:64,941,588-64,943,941
(GRCh37/hg19 by Ensembl)
Size:
2,354 bases
Orientation:
Minus strand

Genomic View for PGAM1P8 Gene

Genes around PGAM1P8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PGAM1P8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PGAM1P8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PGAM1P8 Gene

Proteins for PGAM1P8 Gene

Post-translational modifications for PGAM1P8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PGAM1P8 Gene

Domains & Families for PGAM1P8 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PGAM1P8 Gene

Function for PGAM1P8 Gene

Phenotypes From GWAS Catalog for PGAM1P8 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PGAM1P8 Gene

Localization for PGAM1P8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PGAM1P8 Gene

Pathways & Interactions for PGAM1P8 Gene

PathCards logo

SuperPathways for PGAM1P8 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PGAM1P8 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PGAM1P8 Gene

Drugs & Compounds for PGAM1P8 Gene

No Compound Related Data Available

Transcripts for PGAM1P8 Gene

mRNA/cDNA for PGAM1P8 Gene

2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PGAM1P8 Gene

No ASD Table

Relevant External Links for PGAM1P8 Gene

GeneLoc Exon Structure for
PGAM1P8

Expression for PGAM1P8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PGAM1P8 Gene

mRNA expression in normal human tissues for PGAM1P8 Gene
genes like me logo Genes that share expression patterns with PGAM1P8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PGAM1P8 Gene

Orthologs for PGAM1P8 Gene

Evolution for PGAM1P8 Gene

ENSEMBL:
Gene Tree for PGAM1P8 (if available)
TreeFam:
Gene Tree for PGAM1P8 (if available)

No data available for Orthologs for PGAM1P8 Gene

Paralogs for PGAM1P8 Gene

No data available for Paralogs for PGAM1P8 Gene

Variants for PGAM1P8 Gene

Additional Variant Information for PGAM1P8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PGAM1P8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PGAM1P8 Gene

Disorders for PGAM1P8 Gene

No disorders were found for PGAM1P8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PGAM1P8 Gene

Publications for PGAM1P8 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for PGAM1P8 Gene

Sources for PGAM1P8 Gene