Aliases for PGAM1P11 Gene

Aliases for PGAM1P11 Gene

  • Phosphoglycerate Mutase 1 Pseudogene 11 2 3 5
  • PGAM1P11 5

External Ids for PGAM1P11 Gene

Summaries for PGAM1P11 Gene

GeneCards Summary for PGAM1P11 Gene

PGAM1P11 (Phosphoglycerate Mutase 1 Pseudogene 11) is a Pseudogene.

Additional gene information for PGAM1P11 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PGAM1P11 Gene

Genomics for PGAM1P11 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PGAM1P11 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J010057 Enhancer 0.6 ENCODE dbSUPER 250.7 -0.9 -944 0.4 ZIC2 JUND ZNF362 FOS PGAM1P11 RPL21P21 lnc-LZIC-2 HSALNG0000748 UBE4B KIF1B
GH01J010059 Enhancer 0.3 Ensembl dbSUPER 250.7 +1.8 1830 0.2 PGAM1P11 UBE4B RN7SKP269 ENSG00000228150 LZIC NMNAT1 CTNNBIP1 HSALNG0000748 piR-52079-003 KIF1B
GH01J010055 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 0.7 -2.4 -2419 1.8 ZNF600 CEBPA ATF3 CEBPB FOXA1 ZNF639 IRF2 FOXA2 MAFF NBN RPL21P21 lnc-LZIC-2 KIF1B PGAM1P11 HSALNG0000748 UBE4B
GH01J010063 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 +6.8 6837 4.8 NCOR1 ZNF600 ZNF592 YY1 BHLHE40 FOXA2 RXRA ZNF316 TEAD3 ZBTB33 LZIC UBE4B RN7SKP269 ENSG00000228150 NMNAT1 ENSG00000223989 CTNNBIP1 RNU6-828P KIF1B PGAM1P11
GH01J010073 Enhancer 0.9 ENCODE dbSUPER 0.4 +15.8 15840 2.2 NCOR1 ZNF600 JUND BHLHE40 MNT ZNF316 RAD21 MYC MAX POLR2A UBE4B RN7SKP269 ENSG00000228150 LZIC NMNAT1 RNU6-37P CENPS CTNNBIP1 PGAM1P11 piR-52079-003
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PGAM1P11 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PGAM1P11 Gene

Latest Assembly
chr1:10,058,671-10,059,654
(GRCh38/hg38)
Size:
984 bases
Orientation:
Plus strand

Previous Assembly
chr1:10,118,731-10,119,712
(GRCh37/hg19 by Entrez Gene)
Size:
982 bases
Orientation:
Plus strand

chr1:10,118,729-10,119,706
(GRCh37/hg19 by Ensembl)
Size:
978 bases
Orientation:
Plus strand

Genomic View for PGAM1P11 Gene

Genes around PGAM1P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PGAM1P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PGAM1P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PGAM1P11 Gene

Proteins for PGAM1P11 Gene

Post-translational modifications for PGAM1P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PGAM1P11 Gene

Domains & Families for PGAM1P11 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PGAM1P11 Gene

Function for PGAM1P11 Gene

Phenotypes From GWAS Catalog for PGAM1P11 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PGAM1P11 Gene

Localization for PGAM1P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PGAM1P11 Gene

Pathways & Interactions for PGAM1P11 Gene

PathCards logo

SuperPathways for PGAM1P11 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PGAM1P11 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PGAM1P11 Gene

Drugs & Compounds for PGAM1P11 Gene

No Compound Related Data Available

Transcripts for PGAM1P11 Gene

mRNA/cDNA for PGAM1P11 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PGAM1P11 Gene

No ASD Table

Relevant External Links for PGAM1P11 Gene

GeneLoc Exon Structure for
PGAM1P11

Expression for PGAM1P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PGAM1P11 Gene

mRNA differential expression in normal tissues according to GTEx for PGAM1P11 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x4.2).
genes like me logo Genes that share expression patterns with PGAM1P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PGAM1P11 Gene

Orthologs for PGAM1P11 Gene

Evolution for PGAM1P11 Gene

ENSEMBL:
Gene Tree for PGAM1P11 (if available)
TreeFam:
Gene Tree for PGAM1P11 (if available)
Alliance of Genome Resources:
Additional Orthologs for PGAM1P11

No data available for Orthologs for PGAM1P11 Gene

Paralogs for PGAM1P11 Gene

No data available for Paralogs for PGAM1P11 Gene

Variants for PGAM1P11 Gene

Additional Variant Information for PGAM1P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PGAM1P11
Leiden Open Variation Database (LOVD)
PGAM1P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PGAM1P11 Gene

Disorders for PGAM1P11 Gene

No disorders were found for PGAM1P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PGAM1P11 Gene

Publications for PGAM1P11 Gene

No publications were found for PGAM1P11 Gene.

No data available for Mastermind for PGAM1P11 Gene

Products for PGAM1P11 Gene

Sources for PGAM1P11 Gene