Aliases for PFKP Gene
Aliases for PFKP Gene
External Ids for PFKP Gene
- HGNC: 8878
- Entrez Gene: 5214
- Ensembl: ENSG00000067057
- OMIM: 171840
- UniProtKB: Q01813
Previous GeneCards Identifiers for PFKP Gene
- GC10P003157
- GC10P003069
- GC10P003063
- GC10P003099
- GC10P003045
- GC10P003109
Summaries for PFKP Gene
-
This gene encodes a member of the phosphofructokinase A protein family. The encoded enzyme is the platelet-specific isoform of phosphofructokinase and plays a key role in glycolysis regulation. This gene may play a role in metabolic reprogramming in some cancers, including clear cell renal cell carcinomas, and cancer of the bladder, breast, and lung. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2016]
GeneCards Summary for PFKP Gene
PFKP (Phosphofructokinase, Platelet) is a Protein Coding gene. Diseases associated with PFKP include Clear Cell Renal Cell Carcinoma and Glycogen Storage Disease Vii. Among its related pathways are Glucose metabolism and Glycosaminoglycan metabolism. Gene Ontology (GO) annotations related to this gene include protein complex binding and 6-phosphofructokinase activity. An important paralog of this gene is PFKM.
UniProtKB/Swiss-Prot for PFKP Gene
-
Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
Additional gene information for PFKP Gene
- Monarch Initiative
- Search for PFKP at DataMed
- Search for PFKP at HumanCyc
No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PFKP Gene
Genomics for PFKP Gene
GeneHancer (GH) Regulatory Elements for PFKP Gene
Promoters and enhancers for PFKP Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH10I003067 | Promoter/Enhancer | 2.2 | EPDnew Ensembl ENCODE dbSUPER | 559.5 | +2.3 | 2292 | 3.3 | HDGF ATF1 SMAD1 SIN3A GLI4 ZBTB7B YY1 ZNF121 POLR2B ZNF766 | PFKP LOC101927824 | |
| GH10I003066 | Enhancer | 0.4 | ENCODE | 559.5 | +0.2 | 210 | 0.5 | NRF1 BACH1 EZH2 | PFKP ENSG00000273001 LOC101927824 | |
| GH10I003089 | Enhancer | 1.7 | FANTOM5 Ensembl ENCODE dbSUPER | 20.4 | +27.5 | 27546 | 8.1 | PKNOX1 SMAD1 FOXA2 ARNT NEUROD1 SIN3A ZNF766 E2F8 FOS JUNB | GC10P003095 PFKP PITRM1 PITRM1-AS1 LOC101927824 | |
| GH10I003102 | Enhancer | 0.9 | FANTOM5 ENCODE dbSUPER | 13.9 | +36.8 | 36834 | 0.9 | SP1 JUND HNF4G HNF4A ZFX | GC10P003101 PFKP PITRM1-AS1 PITRM1 GC10P003095 PIR36518 | |
| GH10I003106 | Enhancer | 1 | Ensembl ENCODE dbSUPER | 11.3 | +41.5 | 41510 | 2.1 | USF2 SIN3A MNT SP1 JUND ATF3 HNF4A FOS FOSL2 | PFKP PITRM1 GC10P003101 GC10P003095 PIR36518 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around PFKP on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for PFKP Gene
Genomic Locations for PFKP Gene
- chr10:3,066,333-3,137,712
- (GRCh38/hg38)
- Size:
- 71,380 bases
- Orientation:
- Plus strand
- chr10:3,108,525-3,179,904
- (GRCh37/hg19)
Genomic View for PFKP Gene
Genes around PFKP on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 10p15.2 by Ensembl
- 10p15.2 by Entrez Gene
- 10p15.2 by HGNC
PFKP Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for PFKP Gene
Proteins for PFKP Gene
-
Protein details for PFKP Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q01813-PFKAP_HUMAN
- Recommended name:
- ATP-dependent 6-phosphofructokinase, platelet type
- Protein Accession:
- Q01813
- B3KS15
- Q5VSR7
- Q5VSR8
Protein attributes for PFKP Gene
- Size:
- 784 amino acids
- Molecular mass:
- 85596 Da
- Cofactor:
- Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
- Quaternary structure:
-
- Homo- and heterotetramers. Muscle is M4, liver is L4, and red cell is M3L, M2L2, or ML3. A subunit composition with a higher proportion of platelet type subunits is found in platelets, brain and fibroblasts.
- Miscellaneous:
-
- In human PFK exists as a system of 3 types of subunits, PFKM (muscle), PFKL (liver) and PFKP (platelet) isoenzymes.
Three dimensional structures from OCA and Proteopedia for PFKP Gene
Protein Expression for PFKP Gene
Selected DME Specific Peptides for PFKP Gene
- Q01813:
-
- EVMGRHCG
- QWWLKLRP
- RKNVLGHMQQGG
- EWSGLLEELA
- TPDTPACVV
- VLTSGGD
- RMGIYVGAKV
- VGGWTGQGGS
- GTKRRVFI
- IIIVAEG
- GMNAAVR
- IIGGFEA
- GGTIIGSAR
- TILGHVQRGG
- AMDERRF
- GADAAYI
- VGSIDND
- CGYLALV
- GHVQRGG
- GITNLCVIGG
- VRLPLMECVQ
- QNKPITSEKIKELVV
- CGADWVFLPESPPEE
- ALHRIIE
- NYTTDFI
- IQRGLVLRNE
- FQPVAELK
- PATVSNNVPGSDFS
- QRGGTPS
- DRILASR
- AAREKHE
- VGAPAAGMN
- REGRLKAACNL
- GGDGSLTGA
- VVRMGIY
- LPGKYLE
- GADTALNTI
- CDRIKQSA
Post-translational modifications for PFKP Gene
- GlcNAcylation decreases enzyme activity.
- Ubiquitination at isoforms=15, Lys25, isoforms=2109, Lys139, Lys289, Lys395, Lys400, Lys408, isoforms=2459, isoforms=2480, Lys486, isoforms=2666, isoforms=2688, isoforms=2759, and isoforms=2765
- Glycosylation at Ser540
Other Protein References for PFKP Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- Cell Signaling Technology (CST) Antibodies for PFKP (PFKP)
- Novus Biologicals Antibodies for PFKP
-
Abcam antibodies for PFKP
-
Cloud-Clone Corp. Antibodies for PFKP
- Invitrogen Antibodies for PFKP
- GeneTex PFKP antibody for PFKP
-
Santa Cruz Biotechnology (SCBT) Antibodies for PFKP
Protein Products
-
OriGene Purified Proteins for PFKP
- Search Origene for MassSpec and Protein Over-expression Lysates for PFKP
- Origene Custom Protein Services for PFKP
-
Cloud-Clone Corp. Proteins for PFKP
- Search GeneTex for Proteins for PFKP
-
Abcam proteins for PFKP
Assay Products
-
Cloud-Clone Corp. Assay Kits for PFKP
Domains & Families for PFKP Gene
Gene Families for PFKP Gene
- Human Protein Atlas (HPA):
-
- Enzymes
- Plasma proteins
- Predicted intracellular proteins
- Predicted secreted proteins
Protein Domains for PFKP Gene
- InterPro:
- Blocks:
- ProtoNet:
Suggested Antigen Peptide Sequences for PFKP Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
Q01813UniProtKB/Swiss-Prot:
PFKAP_HUMAN :- Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade "E" sub-subfamily.
- Domain:
-
- Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade "E" sub-subfamily.
Function for PFKP Gene
Molecular function for PFKP Gene
- GENATLAS Biochemistry:
- 6-phosphofructo-1-kinase,expressed in platelet,fructose metabolism,energy pathway
- UniProtKB/Swiss-Prot CatalyticActivity:
- ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate.
- UniProtKB/Swiss-Prot EnzymeRegulation:
- Allosterically activated by ADP, AMP, or fructose 2,6-bisphosphate, and allosterically inhibited by ATP or citrate.
- UniProtKB/Swiss-Prot Function:
- Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
Enzyme Numbers (IUBMB) for PFKP Gene
Phenotypes From GWAS Catalog for PFKP Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0003824 | catalytic activity | IEA | -- |
| GO:0003872 | 6-phosphofructokinase activity | IEA,TAS | 1834056 |
| GO:0005524 | ATP binding | IEA | -- |
| GO:0016301 | kinase activity | IEA | -- |
| GO:0016740 | transferase activity | IEA | -- |
Phenotypes for PFKP Gene
- GenomeRNAi human phenotypes for PFKP:
-
- Increased vaccinia virus (VACV) infection
- Decreased NF-kappaB reporter expression
- Increased transferrin (TF) endocytosis
- Increased circadian period length
- Decreased cell proliferation
- Decreased viability after sindbis virus (SIN) dsTE12Q infection
- Decreased mitophagy mCherry-Parkin protein expression after carbonyl cyanide m-chlorphenylhydrazone (CCCP) stimulation
- Decreased Sindbis virus (SIN) capsid and autophagosome LC3 protein colocalization
- Condensed cis-Golgi
- Decreased viability after gemcitabine stimulation
- Increased simian virus 40 (SV40) infection
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for PFKP
-
-
ViGene Biosciences lentiviral particle packaged cDNA for PFKP gene
-
ViGene Biosciences ready-to-package AAV shRNAs for PFKP gene
- Search ViGene Biosciences for PFKP
CRISPR Products
-
OriGene CRISPR knockouts for PFKP
- genomics-online: gRNA clones - Search results for 135 available PFKP gene related products
- Overview of 135 available PFKP gene related products
- Applied Biological Materials CRISPR for PFKP
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for PFKP
- GenScript: Design CRISPR guide RNA sequences for PFKP
miRNA for PFKP Gene
- miRTarBase miRNAs that target PFKP
-
- hsa-mir-520a-3p (MIRT007336)
- hsa-mir-520b (MIRT007337)
- hsa-mir-520e (MIRT007338)
- hsa-mir-26b-5p (MIRT030323)
- hsa-mir-455-3p (MIRT037818)
- hsa-mir-615-3p (MIRT039986)
- hsa-mir-193b-3p (MIRT041540)
- hsa-mir-17-5p (MIRT056475)
- hsa-mir-20a-5p (MIRT056476)
- hsa-mir-93-5p (MIRT056477)
- hsa-mir-106a-5p (MIRT056478)
- hsa-mir-142-5p (MIRT056479)
- hsa-mir-106b-5p (MIRT056480)
- hsa-mir-302a-3p (MIRT056481)
- hsa-mir-302b-3p (MIRT056482)
- hsa-mir-302c-3p (MIRT056483)
- hsa-mir-302d-3p (MIRT056484)
- hsa-mir-372-3p (MIRT056485)
- hsa-mir-373-3p (MIRT056486)
- hsa-mir-20b-5p (MIRT056487)
- hsa-mir-512-3p (MIRT056488)
- hsa-mir-526b-3p (MIRT056490)
- hsa-mir-520c-3p (MIRT056492)
- hsa-mir-519d-3p (MIRT056493)
- hsa-mir-520d-3p (MIRT056494)
- hsa-mir-595 (MIRT056496)
- hsa-mir-302e (MIRT056498)
- hsa-mir-3163 (MIRT056499)
- hsa-mir-4536-3p (MIRT056500)
- hsa-mir-5590-3p (MIRT056501)
- hsa-mir-6082 (MIRT056502)
- hsa-mir-8075 (MIRT506227)
- hsa-mir-4796-3p (MIRT506228)
- hsa-mir-548ah-5p (MIRT506229)
- hsa-mir-3609 (MIRT506230)
- hsa-mir-524-5p (MIRT535361)
- hsa-mir-520d-5p (MIRT535362)
miRNA Products
- Search ViGene Biosciences for PFKP
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for PFKP
- Browse OriGene Inhibitory RNA Products For PFKP
- genomics-online: shRNA clones - Search results for 135 available PFKP gene related products
- Overview of 135 available PFKP gene related products
-
ViGene Biosciences ready-to-package AAV shRNAs for PFKP gene
Clone Products
- Sino Biological Human cDNA Clone for PFKP
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for PFKP
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for PFKP
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Addgene plasmids for PFKP
- Applied Biological Materials Clones for PFKP
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Cell Line Products
-
Horizon Cell Lines for PFKP
-
ViGene Biosciences adenoviral particle packaged cDNA for PFKP gene
-
ViGene Biosciences lentiviral particle packaged cDNA for PFKP gene
-
ViGene Biosciences ready-to-package AAV shRNAs for PFKP gene
No data available for Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for PFKP Gene
Localization for PFKP Gene
Subcellular locations from UniProtKB/Swiss-Prot for PFKP Gene
- Cytoplasm.
| Compartment | Confidence |
|---|---|
| extracellular | 5 |
| nucleus | 5 |
| cytosol | 5 |
| cytoskeleton | 1 |
| mitochondrion | 1 |
| peroxisome | 1 |
- Cytosol (3)
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005634 | nucleus | IDA,HDA | 21630459 |
| GO:0005737 | cytoplasm | IEA,IDA | 25468996 |
| GO:0005829 | cytosol | TAS | -- |
| GO:0016020 | membrane | IDA,HDA | 19946888 |
| GO:0031012 | extracellular matrix | IDA | 23979707 |
Pathways & Interactions for PFKP Gene
| SuperPathway | Contained pathways | ||
|---|---|---|---|
| 1 | Glucose metabolism |
.52
|
.01
|
| 2 | Carbon metabolism | ||
| 3 | Metabolism |
.37
|
|
| 4 | AMP-activated Protein Kinase (AMPK) Signaling | ||
| 5 | Central carbon metabolism in cancer | ||
Pathways by source for PFKP Gene
1 Cell Signaling Technology pathway for PFKP Gene
4 BioSystems pathways for PFKP Gene
4 Reactome pathways for PFKP Gene
11 KEGG pathways for PFKP Gene
1 GeneGo (Thomson Reuters) pathway for PFKP Gene
2 Qiagen pathways for PFKP Gene
UniProtKB/Swiss-Prot Q01813-PFKAP_HUMAN
- Pathway: Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 3/4.
Interacting Proteins for PFKP Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006002 | fructose 6-phosphate metabolic process | IEA | -- |
| GO:0006096 | glycolytic process | IEA | -- |
| GO:0008152 | metabolic process | IEA | -- |
| GO:0016310 | phosphorylation | IEA | -- |
| GO:0061615 | glycolytic process through fructose-6-phosphate | IEA | -- |
No data available for SIGNOR curated interactions for PFKP Gene
Drugs & Compounds for PFKP Gene
| Name | Synonyms | Role | CAS Number | PubChem IDs | PubMed IDs | |
|---|---|---|---|---|---|---|
| ADP |
|
Full agonist, Agonist | 58-64-0 |
|
||
| beta-D-Fructose 1,6-bisphosphate |
|
34693-15-7 |
|
|||
| Beta-D-Fructose 6-phosphate |
|
|
||||
| D-Tagatose 1,6-bisphosphate |
|
|
||||
| D-Tagatose 6-phosphate |
|
|
Transcripts for PFKP Gene
mRNA/cDNA for PFKP Gene
- (15) REFSEQ mRNAs :
- (13) Additional mRNA sequences :
- (690) Selected AceView cDNA sequences:
- (12) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for PFKP Gene
- Phosphofructokinase, platelet:
- Representative Sequences:
CRISPR Products
-
OriGene CRISPR knockouts for PFKP
- genomics-online: gRNA clones - Search results for 135 available PFKP gene related products
- Overview of 135 available PFKP gene related products
- Applied Biological Materials CRISPR for PFKP
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for PFKP
- GenScript: Design CRISPR guide RNA sequences for PFKP
miRNA Products
- Search ViGene Biosciences for PFKP
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for PFKP
- Browse OriGene Inhibitory RNA Products For PFKP
- genomics-online: shRNA clones - Search results for 135 available PFKP gene related products
- Overview of 135 available PFKP gene related products
-
ViGene Biosciences ready-to-package AAV shRNAs for PFKP gene
Clone Products
- Sino Biological Human cDNA Clone for PFKP
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for PFKP
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for PFKP
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Addgene plasmids for PFKP
- Applied Biological Materials Clones for PFKP
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
| ExUns: | 1 | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9a | · | 9b | · | 9c | · | 9d | ^ | 10 | ^ | 11 | ^ | 12a | · | 12b | · | 12c | ^ | 13 | ^ | 14 | ^ | 15 | ^ | 16a | · | 16b | ^ | 17 | ^ | 18 | ^ | 19 | ^ | 20 | ^ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||||||||
| SP2: | - | - | - | - | - | - | - | - | - | |||||||||||||||||||||||||||||||||||||||||||
| SP3: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP4: | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||||||||||
| SP5: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP6: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP7: | - | |||||||||||||||||||||||||||||||||||||||||||||||||||
| SP8: |
| ExUns: | 21a | · | 21b | ^ | 22 | ^ | 23 | ^ | 24 | ^ | 25 | ^ | 26a | · | 26b | · | 26c |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | - | ||||||||||||||||
| SP2: | - | ||||||||||||||||
| SP3: | - | ||||||||||||||||
| SP4: | |||||||||||||||||
| SP5: | |||||||||||||||||
| SP6: | |||||||||||||||||
| SP7: | |||||||||||||||||
| SP8: |
Expression for PFKP Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
- Neural Tube (Nervous System)
- Brain (Nervous System)
- Heart (Cardiovascular System)
- Gut Tube (Gastrointestinal Tract)
-
Gonad (Reproductive System)
- Primordial Germ Cells Primitive Gonad
-
Testis (Reproductive System)
This gene is overexpressed in Fetal heart (9.2).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for PFKP Gene
- Elite partner
NURSA nuclear receptor signaling pathways regulating expression of PFKP Gene:
PFKPSOURCE GeneReport for Unigene cluster for PFKP Gene:
Hs.26010Evidence on tissue expression from TISSUES for PFKP Gene
- Nervous system(5)
- Pancreas(4.5)
- Eye(3.5)
- Lung(3.4)
- Kidney(3.2)
- Liver(3)
- Intestine(2.8)
- Muscle(2.8)
- Blood(2.6)
- Heart(2.6)
- Skin(2.6)
Primer Products
-
OriGene qPCR primer pairs for PFKP
-
OriGene qPCR primer pairs and template standards for PFKP
No data available for mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for PFKP Gene
Orthologs for PFKP Gene
This gene was present in the common ancestor of animals and fungi.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | PFKP 34 |
|
OneToOne | |
| dog (Canis familiaris) |
Mammalia | PFKP 33 34 |
|
||
| cow (Bos Taurus) |
Mammalia | PFKP 33 34 |
|
||
| rat (Rattus norvegicus) |
Mammalia | Pfkp 33 |
|
||
| mouse (Mus musculus) |
Mammalia | Pfkp 33 16 34 |
|
||
| platypus (Ornithorhynchus anatinus) |
Mammalia | PFKP 34 |
|
OneToOne | |
| oppossum (Monodelphis domestica) |
Mammalia | PFKP 34 |
|
OneToOne | |
| chicken (Gallus gallus) |
Aves | PFKP 34 |
|
OneToOne | |
| lizard (Anolis carolinensis) |
Reptilia | PFKP 34 |
|
OneToOne | |
| tropical clawed frog (Silurana tropicalis) |
Amphibia | pfkp 33 |
|
||
| MGC75635 33 |
|
||||
| African clawed frog (Xenopus laevis) |
Amphibia | MGC68847 33 |
|
||
| zebrafish (Danio rerio) |
Actinopterygii | pfkpa 34 |
|
OneToMany | |
| pfkpb 33 34 |
|
||||
| Dr.12547 33 |
|
||||
| fruit fly (Drosophila melanogaster) |
Insecta | Pfk 35 34 |
|
||
| worm (Caenorhabditis elegans) |
Secernentea | Y71H10A.1b 35 |
|
|
|
| Y71H10A.1a 35 |
|
|
|||
| pfk-1 34 |
|
ManyToMany | |||
| pfk-2 34 |
|
ManyToMany | |||
| C50F4.2 35 |
|
|
|||
| A. gosspyii yeast (Ashbya gossypii) |
Saccharomycetes | AGOS_AEL208W 33 |
|
||
| K. lactis yeast (Kluyveromyces lactis) |
Saccharomycetes | KLLA0A05544g 33 |
|
||
| baker's yeast (Saccharomyces cerevisiae) |
Saccharomycetes | PFK1 33 34 |
|
||
| PFK2 34 |
|
ManyToMany | |||
| sea squirt (Ciona savignyi) |
Ascidiacea | -- 34 |
|
OneToMany | |
| sea squirt (Ciona intestinalis) |
Ascidiacea | Cin.3271 33 |
|
- Species where no ortholog for PFKP was found in the sources mined by GeneCards:
-
- Actinobacteria (Mycobacterium tuberculosis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- wheat (Triticum aestivum)
Paralogs for PFKP Gene
(6) SIMAP similar genes for PFKP Gene using alignment to 9 proteins:
Variants for PFKP Gene
| SNP ID | Clin | Chr 10 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs869025258 | likely-benign, Anophthalmia - microphthalmia | 3,105,466(+) | GG/GGG | coding_sequence_variant, frameshift | |
| rs1000093095 | -- | 3,118,258(+) | A/G | intron_variant | |
| rs1000187549 | -- | 3,100,310(+) | G/C | genic_upstream_transcript_variant, intron_variant | |
| rs1000189029 | -- | 3,070,958(+) | G/A | genic_upstream_transcript_variant, intron_variant | |
| rs1000229266 | -- | 3,125,473(+) | G/A/T | intron_variant |
Residual Variation Intolerance Score:
16.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
2.58;
44.82% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for PFKP Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for PFKP Gene
Disorders for PFKP Gene
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| clear cell renal cell carcinoma |
|
|
| glycogen storage disease vii |
|
|
| miliary tuberculosis |
|
|
Search PFKP in MalaCards
View complete list of genes associated with diseases
Additional Disease Information for PFKP
- Genetic Association Database
- (GAD)
- Human Genome Epidemiology Navigator
- (HuGE)
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
No data available for UniProtKB/Swiss-Prot and Genatlas for PFKP Gene
Publications for PFKP Gene
- Cloning of a complete protein-coding sequence of human platelet-type phosphofructokinase isozyme from pancreatic islet. (PMID: 8117307) Eto K … Kadowaki T (Biochemical and biophysical research communications 1994) 3 4 22 58
- Isolation and sequence of a cDNA encoding human platelet phosphofructokinase. (PMID: 1834056) Simpson CJ … Fothergill-Gilmore LA (Biochemical and biophysical research communications 1991) 3 4 22 58
- Physiogenomic analysis of statin-treated patients: domain-specific counter effects within the ACACB gene on low-density lipoprotein cholesterol? (PMID: 20602615) Ruaño G … Wu AH (Pharmacogenomics 2010) 3 44 58
- Obesity and diabetes genes are associated with being born small for gestational age: results from the Auckland Birthweight Collaborative study. (PMID: 20712903) Morgan AR … Mitchell EA (BMC medical genetics 2010) 3 44 58
- Physiogenomic comparison of edema and BMI in patients receiving rosiglitazone or pioglitazone. (PMID: 18996102) Ruaño G … Hanks S (Clinica chimica acta; international journal of clinical chemistry 2009) 3 44 58
Products for PFKP Gene
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- Invitrogen Antibodies for PFKP
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
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- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Addgene plasmids for PFKP
- antibodies-online: Search results for 100 available PFKP Antibodies ranked by validation data
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- GeneTex PFKP antibody for PFKP
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- Santa Cruz Biotechnology (SCBT) Antibodies for PFKP
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- Horizon Cell Lines for PFKP
- genomics-online: cdna clones - Search results for 135 available PFKP gene related products
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- Overview of 135 available PFKP gene related products
- genomics-online: shRNA clones - Search results for 135 available PFKP gene related products
- Overview of 135 available PFKP gene related products
Sources for PFKP Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
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- (119) Disease Ontology
- (120) Genetics Home Reference
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- (123) CDC
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- (125) NCBI Bookshelf
- (126) ClinVar
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- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
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- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew