Aliases for PDE9A-AS1 Gene

Subcategory (RNA class) for PDE9A-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for PDE9A-AS1 Gene

  • PDE9A Antisense RNA 1 2 3 5
  • PDE9A-AS1 2 5
  • NONHSAG032951.2 91
  • HSALNG0133338 164
  • Lnc-WDR4-5 165

External Ids for PDE9A-AS1 Gene

Summaries for PDE9A-AS1 Gene

GeneCards Summary for PDE9A-AS1 Gene

PDE9A-AS1 (PDE9A Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for PDE9A-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PDE9A-AS1 Gene

Genomics for PDE9A-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PDE9A-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PDE9A-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PDE9A-AS1 Gene

Genomic Locations for PDE9A-AS1 Gene
chr21:42,733,594-42,742,433
(GRCh38/hg38)
Size:
8,840 bases
Orientation:
Minus strand
chr21:44,153,704-44,161,868
(GRCh37/hg19)
Size:
8,165 bases
Orientation:
Minus strand

Genomic View for PDE9A-AS1 Gene

Genes around PDE9A-AS1 on UCSC Golden Path with GeneCards custom track
PDE9A-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
PDE9A-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PDE9A-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PDE9A-AS1 Gene

Proteins for PDE9A-AS1 Gene

Post-translational modifications for PDE9A-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PDE9A-AS1 Gene

Domains & Families for PDE9A-AS1 Gene

Gene Families for PDE9A-AS1 Gene

genes like me logo Genes that share domains with PDE9A-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PDE9A-AS1 Gene

Function for PDE9A-AS1 Gene

Phenotypes From GWAS Catalog for PDE9A-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PDE9A-AS1 Gene

Localization for PDE9A-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PDE9A-AS1 Gene

Pathways & Interactions for PDE9A-AS1 Gene

PathCards logo

SuperPathways for PDE9A-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PDE9A-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PDE9A-AS1 Gene

Drugs & Compounds for PDE9A-AS1 Gene

No Compound Related Data Available

Transcripts for PDE9A-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for PDE9A-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00000B7DAB_9606 lncRNA 1754 4

HGNC: 40440,

Ensembl: ENST00000437426 (view in UCSC) ,

LNCipedia: lnc-WDR4-5:1,

NONCODE: NONHSAT082344.2,

URS00009BECB1_9606 lncRNA 1754 2

LncBook: HSALNT0274101,

NONCODE: NONHSAT191540.1,

PDE9A-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for PDE9A-AS1 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for PDE9A-AS1 Gene

No ASD Table

Relevant External Links for PDE9A-AS1 Gene

GeneLoc Exon Structure for
PDE9A-AS1

Expression for PDE9A-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for PDE9A-AS1

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PDE9A-AS1 Gene

Orthologs for PDE9A-AS1 Gene

Evolution for PDE9A-AS1 Gene

ENSEMBL:
Gene Tree for PDE9A-AS1 (if available)
TreeFam:
Gene Tree for PDE9A-AS1 (if available)

No data available for Orthologs for PDE9A-AS1 Gene

Paralogs for PDE9A-AS1 Gene

No data available for Paralogs for PDE9A-AS1 Gene

Variants for PDE9A-AS1 Gene

Additional dbSNP identifiers (rs#s) for PDE9A-AS1 Gene

Additional Variant Information for PDE9A-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PDE9A-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PDE9A-AS1 Gene

Disorders for PDE9A-AS1 Gene

Additional Disease Information for PDE9A-AS1

No disorders were found for PDE9A-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PDE9A-AS1 Gene

Publications for PDE9A-AS1 Gene

  1. Genome-wide association study of lung function decline in adults with and without asthma. (PMID: 22424883) Imboden M … Probst-Hensch NM (The Journal of allergy and clinical immunology 2012) 3

No data available for Mastermind for PDE9A-AS1 Gene

Products for PDE9A-AS1 Gene

Sources for PDE9A-AS1 Gene