Aliases for PDCD6IPP1 Gene

Aliases for PDCD6IPP1 Gene

  • PDCD6IP Pseudogene 1 2 3 5
  • Programmed Cell Death 6 Interacting Protein Pseudogene 3

External Ids for PDCD6IPP1 Gene

Previous GeneCards Identifiers for PDCD6IPP1 Gene

  • GC15U901752
  • GC15P022731
  • GC15P022741
  • GC15P022743
  • GC15P022745
  • GC15P022732
  • GC15P022733
  • GC15P022734
  • GC15P022735
  • GC15P022737
  • GC15P022738
  • GC15P022739

Summaries for PDCD6IPP1 Gene

GeneCards Summary for PDCD6IPP1 Gene

PDCD6IPP1 (PDCD6IP Pseudogene 1) is a Pseudogene.

Additional gene information for PDCD6IPP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PDCD6IPP1 Gene

Genomics for PDCD6IPP1 Gene

GeneHancer (GH) Regulatory Elements for PDCD6IPP1 Gene

Promoters and enhancers for PDCD6IPP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J022714 Promoter 0.7 Ensembl 0.4 -11.1 -11104 3.6 ZBTB26 ZBTB17 ZNF76 ZNF335 ZBTB48 PRDM6 ZFX L3MBTL2 CTCF EZH2 ENSG00000277867 ENSG00000283273 LOC100133165 lnc-NIPA1-4 lnc-NIPA1-5 piR-36618-001 piR-54282-001 PDCD6IPP1 lnc-CYFIP1-5
GH15J022724 Enhancer 0.2 Ensembl 0.7 -3.0 -3003 0.2 PDCD6IPP1 lnc-NIPA1-4 lnc-CYFIP1-5
GH15J022737 Enhancer 0.3 Ensembl 0.4 +10.7 10697 0.4 FOXA2 piR-48209-208 PDCD6IPP1 lnc-CYFIP1-5
GH15J022739 Enhancer 0.2 Ensembl 0.4 +12.3 12296 0.8 piR-48209-208 PDCD6IPP1 lnc-CYFIP1-5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PDCD6IPP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PDCD6IPP1 Gene

Genomic Locations for PDCD6IPP1 Gene
chr15:22,727,104-22,744,918
(GRCh38/hg38)
Size:
17,815 bases
Orientation:
Plus strand

Genomic View for PDCD6IPP1 Gene

Genes around PDCD6IPP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PDCD6IPP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PDCD6IPP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PDCD6IPP1 Gene

Proteins for PDCD6IPP1 Gene

Post-translational modifications for PDCD6IPP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PDCD6IPP1 Gene

Domains & Families for PDCD6IPP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PDCD6IPP1 Gene

Function for PDCD6IPP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PDCD6IPP1 Gene

Localization for PDCD6IPP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PDCD6IPP1 Gene

Pathways & Interactions for PDCD6IPP1 Gene

PathCards logo

SuperPathways for PDCD6IPP1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for PDCD6IPP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PDCD6IPP1 Gene

Drugs & Compounds for PDCD6IPP1 Gene

No Compound Related Data Available

Transcripts for PDCD6IPP1 Gene

mRNA/cDNA for PDCD6IPP1 Gene

2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PDCD6IPP1 Gene

No ASD Table

Relevant External Links for PDCD6IPP1 Gene

GeneLoc Exon Structure for
PDCD6IPP1

Expression for PDCD6IPP1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PDCD6IPP1 Gene

Orthologs for PDCD6IPP1 Gene

Evolution for PDCD6IPP1 Gene

ENSEMBL:
Gene Tree for PDCD6IPP1 (if available)
TreeFam:
Gene Tree for PDCD6IPP1 (if available)

No data available for Orthologs for PDCD6IPP1 Gene

Paralogs for PDCD6IPP1 Gene

No data available for Paralogs for PDCD6IPP1 Gene

Variants for PDCD6IPP1 Gene

Additional Variant Information for PDCD6IPP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PDCD6IPP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PDCD6IPP1 Gene

Disorders for PDCD6IPP1 Gene

No disorders were found for PDCD6IPP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PDCD6IPP1 Gene

Publications for PDCD6IPP1 Gene

No publications were found for PDCD6IPP1 Gene.

Products for PDCD6IPP1 Gene

Sources for PDCD6IPP1 Gene