Aliases for PARP11-AS1 Gene

Subcategory (RNA class) for PARP11-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for PARP11-AS1 Gene

  • PARP11 Antisense RNA 1 2 3
  • Novel Transcript, Antisense To PARP11 5
  • NONHSAG010228 92
  • HSALNG0088677 167
  • Lnc-PRMT8-2 168
  • AC005842.1 5
  • PARP11-AS1 2

External Ids for PARP11-AS1 Gene

Summaries for PARP11-AS1 Gene

GeneCards Summary for PARP11-AS1 Gene

PARP11-AS1 (PARP11 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for PARP11-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PARP11-AS1 Gene

Genomics for PARP11-AS1 Gene

GeneHancer (GH) Regulatory Elements for PARP11-AS1 Gene

Promoters and enhancers for PARP11-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J003868 Enhancer 0.2 Ensembl 500.7 -0.1 -72 0.2 PARP11-AS1 PARP11 piR-61101-100
GH12J003869 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.7 +3.3 3346 5.4 ZBTB40 EP300 SIN3A NRF1 POLR2G SP1 PHF8 ZFX ZNF10 POLR2A PARP11 piR-57669 ENSG00000227081 TULP3 PARP11-AS1
GH12J003884 Enhancer 0.8 ENCODE CraniofacialAtlas 0.4 +17.0 16983 1.8 CTCF RCOR1 RAD21 TRIM22 TEAD1 SMC3 NR2F2 SMARCA5 ZNF654 RFX5 CCND2 CCND2-AS1 PARP11 PARP11-AS1 HSALNG0088680
GH12J003896 Promoter/Enhancer 0.8 Ensembl ENCODE 0.3 +29.3 29270 2.9 CEBPG SPI1 PKNOX1 SMARCA4 HLF GATA3 CCND2 CCND2-AS1 PARP11 PARP11-AS1 HSALNG0088680
GH12J003863 Enhancer 0.3 ENCODE 0.7 -4.5 -4483 0.2 ZNF217 CTBP1 PARP11-AS1 PARP11 piR-61101-100
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PARP11-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PARP11-AS1 Gene

Genomic Locations for PARP11-AS1 Gene
chr12:3,868,373-3,916,586
(GRCh38/hg38)
Size:
48,214 bases
Orientation:
Plus strand
chr12:3,980,900-4,019,504
(GRCh37/hg19)
Size:
38,605 bases
Orientation:
Plus strand

Genomic View for PARP11-AS1 Gene

Genes around PARP11-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PARP11-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PARP11-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PARP11-AS1 Gene

Proteins for PARP11-AS1 Gene

Post-translational modifications for PARP11-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PARP11-AS1 Gene

Domains & Families for PARP11-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PARP11-AS1 Gene

Function for PARP11-AS1 Gene

Phenotypes From GWAS Catalog for PARP11-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PARP11-AS1 Gene

Localization for PARP11-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PARP11-AS1 Gene

Pathways & Interactions for PARP11-AS1 Gene

PathCards logo

SuperPathways for PARP11-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for PARP11-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PARP11-AS1 Gene

Drugs & Compounds for PARP11-AS1 Gene

No Compound Related Data Available

Transcripts for PARP11-AS1 Gene

mRNA/cDNA for PARP11-AS1 Gene

10 RNACentral transcripts :
7 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
1 LncBook transcripts :
5 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for PARP11-AS1 Gene

No ASD Table

Relevant External Links for PARP11-AS1 Gene

GeneLoc Exon Structure for
PARP11-AS1

Expression for PARP11-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PARP11-AS1 Gene

Orthologs for PARP11-AS1 Gene

Evolution for PARP11-AS1 Gene

ENSEMBL:
Gene Tree for PARP11-AS1 (if available)
TreeFam:
Gene Tree for PARP11-AS1 (if available)

No data available for Orthologs for PARP11-AS1 Gene

Paralogs for PARP11-AS1 Gene

No data available for Paralogs for PARP11-AS1 Gene

Variants for PARP11-AS1 Gene

Additional dbSNP identifiers (rs#s) for PARP11-AS1 Gene

Additional Variant Information for PARP11-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PARP11-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PARP11-AS1 Gene

Disorders for PARP11-AS1 Gene

No disorders were found for PARP11-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PARP11-AS1 Gene

Publications for PARP11-AS1 Gene

No publications were found for PARP11-AS1 Gene.

No data available for Mastermind for PARP11-AS1 Gene

Products for PARP11-AS1 Gene

Sources for PARP11-AS1 Gene