PARGP1 Gene (Pseudogene)

Poly(ADP-Ribose) Glycohydrolase Pseudogene 1

GC10M045854
GIFtS:
9
See more...

Aliases for PARGP1 Gene

Aliases for PARGP1 Gene

  • Poly(ADP-Ribose) Glycohydrolase Pseudogene 1 2 3 5
  • PRO1102 3
  • PARGP1 5

External Ids for PARGP1 Gene

Previous GeneCards Identifiers for PARGP1 Gene

  • GC10P051627

Summaries for PARGP1 Gene

GeneCards Summary for PARGP1 Gene

PARGP1 (Poly(ADP-Ribose) Glycohydrolase Pseudogene 1) is a Pseudogene.

Additional gene information for PARGP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PARGP1 Gene

Genomics for PARGP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for PARGP1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PARGP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PARGP1 Gene

Genomic Locations for PARGP1 Gene
chr10:45,854,093-45,972,428
(GRCh38/hg38)
Size:
118,336 bases
Orientation:
Minus strand
chr10:51,623,413-51,732,824
(GRCh37/hg19)
Size:
109,412 bases
Orientation:
Plus strand

Genomic View for PARGP1 Gene

Genes around PARGP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PARGP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PARGP1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for PARGP1 Gene

Proteins for PARGP1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for PARGP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PARGP1 Gene

Domains & Families for PARGP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PARGP1 Gene

Function for PARGP1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for PARGP1 Gene

Phenotypes for PARGP1 Gene

GenomeRNAi human phenotypes for PARGP1:
genes like me logo Genes that share phenotypes with PARGP1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PARGP1 Gene

Localization for PARGP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PARGP1 Gene

Pathways & Interactions for PARGP1 Gene

PathCards logo

SuperPathways for PARGP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PARGP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PARGP1 Gene

Drugs & Compounds for PARGP1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for PARGP1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for PARGP1 Gene

5 NCBI additional mRNA sequence :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PARGP1 Gene

No ASD Table

Relevant External Links for PARGP1 Gene

GeneLoc Exon Structure for
PARGP1

Expression for PARGP1 Gene

Products:

  1. Primer
  2. Gene Expression Assay

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PARGP1 Gene

mRNA expression in normal human tissues for PARGP1 Gene
mRNA expression by GTEx for PARGP1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for PARGP1

genes like me logo Genes that share expression patterns with PARGP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PARGP1 Gene

Orthologs for PARGP1 Gene

Evolution for PARGP1 Gene

ENSEMBL:
Gene Tree for PARGP1 (if available)
TreeFam:
Gene Tree for PARGP1 (if available)

No data available for Orthologs for PARGP1 Gene

Paralogs for PARGP1 Gene

No data available for Paralogs for PARGP1 Gene

Variants for PARGP1 Gene

Products:

  1. SNP Genotyping and Copy Number Assay

Structural Variations from Database of Genomic Variants (DGV) for PARGP1 Gene

Variant ID Type Subtype PubMed ID
dgv127e214 CNV gain 21293372
dgv454n106 CNV deletion 24896259
esv27601 CNV loss 19812545
esv2853791 CNV deletion 24192839
esv3577172 CNV gain 25503493
esv3891807 CNV loss 25118596
nsv1069051 CNV deletion 25765185
nsv1118165 CNV deletion 24896259
nsv508583 CNV deletion 20534489
nsv510992 OTHER complex 20534489
nsv8631 CNV gain+loss 18304495
nsv8632 CNV loss 18304495
nsv8645 CNV loss 18304495
nsv8647 CNV loss 18304495
nsv8648 CNV loss 18304495
nsv8651 CNV gain 18304495
nsv8652 CNV loss 18304495
nsv8653 CNV loss 18304495
nsv8654 CNV gain+loss 18304495
nsv947917 CNV duplication 23825009
nsv947918 CNV duplication 23825009
nsv947919 CNV duplication 23825009
nsv947920 CNV duplication 23825009
nsv947995 CNV duplication 23825009
nsv947996 CNV duplication 23825009
nsv947997 CNV duplication 23825009
nsv950960 CNV deletion 24416366

Additional Variant Information for PARGP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PARGP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for PARGP1 Gene

Disorders for PARGP1 Gene

Additional Disease Information for PARGP1

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for PARGP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PARGP1 Gene

Publications for PARGP1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  2. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P … Rogers J (Nature 2004) 3

ExternalLinks

View latest publications for PARGP1 gene in Mastermind

Products for PARGP1 Gene

Sources for PARGP1 Gene