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Aliases for PARD6G-AS1 Gene
Data sources for PARD6G-AS1 Gene:
Subcategory (RNA class) for PARD6G-AS1 Gene
lncRNA
Aliases for PARD6G-AS1 Gene
- PARD6G Antisense RNA 1 (HGNC, NCBI Entrez Gene, Ensembl)
- PARD6G Antisense RNA 1 (Non-Protein Coding) (HGNC, NCBI Entrez Gene)
- PARD6G-AS1 (Ensembl, LNCipedia)
- NONHSAG024264.2 (NONCODE)
- HSALNG0122821 (LncBook)
- HSALNG0122822 (LncBook)
External Ids for PARD6G-AS1 Gene
- HGNC: 44109
- NCBI Entrez Gene: 100130522
- Ensembl: ENSG00000267270
Previous GeneCards Identifiers for PARD6G-AS1 Gene
- GC18P077906
Summaries for PARD6G-AS1 Gene
GeneCards Summary for PARD6G-AS1 Gene
PARD6G-AS1 (PARD6G Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with PARD6G-AS1 include Patau Syndrome and Transient Neonatal Diabetes Mellitus.
Additional gene information for PARD6G-AS1 Gene
- HGNC (44109)
- NCBI Entrez Gene (100130522)
- Ensembl (ENSG00000267270)
- Open Targets Platform(ENSG00000267270)
- Search for PARD6G-AS1 at DataMed
- Search for PARD6G-AS1 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PARD6G-AS1 Gene
Genomics for PARD6G-AS1 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for PARD6G-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around PARD6G-AS1 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for PARD6G-AS1 Gene
Latest Assembly
- chr18:80,147,668-80,179,839
- (GRCh38/hg38)
- Size:
- 32,172 bases
- Orientation:
- Plus strand
Previous Assembly
- chr18:77,905,807-77,936,315
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 30,509 bases
- Orientation:
- Plus strand
- chr18:77,905,807-77,936,315
- (GRCh37/hg19 by Ensembl)
- Size:
- 30,509 bases
- Orientation:
- Plus strand
Genomic View for PARD6G-AS1 Gene
Genes around PARD6G-AS1 on UCSC Golden Path with GeneCards custom track
PARD6G-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
- Cytogenetic band:
-
- 18q23 by HGNC
- 18q23 by Entrez Gene
- 18q23 by Ensembl
PARD6G-AS1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for PARD6G-AS1 Gene
Proteins for PARD6G-AS1 Gene
Post-translational modifications for PARD6G-AS1 Gene
No Post-translational modifications
No data available for DME Specific Peptides for PARD6G-AS1 Gene
Domains & Families for PARD6G-AS1 Gene
Gene Families for PARD6G-AS1 Gene
- HGNC:
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PARD6G-AS1 Gene
Function for PARD6G-AS1 Gene
Phenotypes From GWAS Catalog for PARD6G-AS1 Gene
CRISPR products for research
Inhibitory RNAs for research
- Origene shrna and RNAi products in human, mouse, rat for PARD6G-AS1
- Browse OriGene Inhibitory RNA Products For PARD6G-AS1
Clone products for research
Cell Lines for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PARD6G-AS1 Gene
Localization for PARD6G-AS1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PARD6G-AS1 Gene
Transcripts for PARD6G-AS1 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for PARD6G-AS1 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS00007C7503_9606 | lncRNA | 1060 | 4 |
Ensembl: ENST00000588226 (view in UCSC) , LncBook: HSALNT0253907, LNCipedia: PARD6G-AS1:8, NONCODE: NONHSAT178131.1, |
| URS0000759BB3_9606 | lncRNA | 737 | 4 |
RefSeq: NR_028340, LncBook: HSALNT0253902, LNCipedia: PARD6G-AS1:3, NONCODE: NONHSAT178129.1, |
| URS00007CF92D_9606 | lncRNA | 584 | 4 |
Ensembl: ENST00000587254 (view in UCSC) , LncBook: HSALNT0253901, LNCipedia: PARD6G-AS1:4, NONCODE: NONHSAT178127.1, |
| URS00007D598A_9606 | lncRNA | 525 | 4 |
Ensembl: ENST00000585422 (view in UCSC) , LncBook: HSALNT0253906, LNCipedia: PARD6G-AS1:7, NONCODE: NONHSAT178132.1, |
| URS00007E2E16_9606 | lncRNA | 650 | 3 |
Ensembl: ENST00000589574 (view in UCSC) , LncBook: HSALNT0253903, LNCipedia: PARD6G-AS1:6, |
PARD6G-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for PARD6G-AS1 Gene
- 3 REFSEQ mRNAs :
- 5 NCBI additional mRNA sequence :
CRISPR products for research
Inhibitory RNAs for research
- Origene shrna and RNAi products in human, mouse, rat for PARD6G-AS1
- Browse OriGene Inhibitory RNA Products For PARD6G-AS1
Clone products for research
Relevant External Links for PARD6G-AS1 Gene
- GeneLoc Exon Structure for
- PARD6G-AS1
Expression for PARD6G-AS1 Gene
mRNA differential expression in normal tissues according to GTEx for PARD6G-AS1 Gene
This gene is overexpressed in Pituitary (x4.3).
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for PARD6G-AS1
SOURCE GeneReport for Unigene cluster for PARD6G-AS1 Gene:
Hs.352602Primer products for research
-
OriGene qPCR primer pairs for PARD6G-AS1
Gene Expression Assays for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PARD6G-AS1 Gene
Orthologs for PARD6G-AS1 Gene
No data available for Orthologs for PARD6G-AS1 Gene
Paralogs for PARD6G-AS1 Gene
No data available for Paralogs for PARD6G-AS1 Gene
Variants for PARD6G-AS1 Gene
All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv3413n100 | CNV | gain | 25217958 |
| dgv3414n100 | CNV | gain | 25217958 |
| dgv3415n100 | CNV | gain | 25217958 |
| esv25081 | CNV | loss | 19812545 |
| esv2661105 | CNV | deletion | 23128226 |
| esv2674259 | CNV | deletion | 23128226 |
| esv2676946 | CNV | deletion | 23128226 |
| esv3583199 | CNV | loss | 25503493 |
| esv3643326 | CNV | loss | 21293372 |
| esv3643330 | CNV | loss | 21293372 |
| esv3643331 | CNV | gain | 21293372 |
| esv3643332 | CNV | loss | 21293372 |
| esv3643333 | CNV | gain | 21293372 |
| esv3643334 | CNV | loss | 21293372 |
| esv3643335 | CNV | loss | 21293372 |
| esv3643336 | CNV | loss | 21293372 |
| esv3643337 | CNV | loss | 21293372 |
| nsv1062516 | CNV | gain | 25217958 |
| nsv1065902 | CNV | gain | 25217958 |
| nsv1160552 | CNV | duplication | 26073780 |
| nsv428359 | CNV | gain | 18775914 |
| nsv458317 | CNV | gain | 19166990 |
| nsv577970 | CNV | gain | 21841781 |
| nsv953932 | CNV | deletion | 24416366 |
Additional Variant Information for PARD6G-AS1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- PARD6G-AS1
SNP Genotyping and Copy Number Assays for research
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for PARD6G-AS1 Gene
Disorders for PARD6G-AS1 Gene
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| patau syndrome |
|
|
| transient neonatal diabetes mellitus |
|
|
| orofaciodigital syndrome viii |
|
|
| beckwith-wiedemann syndrome |
|
|
Search PARD6G-AS1 in MalaCards
View complete list of genes associated with diseases
Additional Disease Information for PARD6G-AS1
- Atlas
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
- Open Targets Platform
- Open Targets Platform
No data available for UniProtKB/Swiss-Prot and Genatlas for PARD6G-AS1 Gene
Publications for PARD6G-AS1 Gene
- Maternal 5mCpG Imprints at the PARD6G-AS1 and GCSAML Differentially Methylated Regions Are Decoupled From Parent-of-Origin Expression Effects in Multiple Human Tissues. (PMID: 29545821) de Sá Machado Araújo G … Medina-Acosta E (Frontiers in genetics 2018) 3
- Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose JE … Uhl GR (Molecular medicine (Cambridge, Mass.) 2010) 3
- Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
- Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3
Products for PARD6G-AS1 Gene
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- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for PARD6G-AS1
- Origene Custom Protein Services for PARD6G-AS1
- Origene shrna and RNAi products in human, mouse, rat for PARD6G-AS1
- Browse OriGene Inhibitory RNA Products For PARD6G-AS1
- OriGene qPCR primer pairs for PARD6G-AS1
- Browse CRISPR knockouts for PARD6G-AS1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For PARD6G-AS1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- antibodies-online: Search results for available LOC100130522 related products ranked by validation data
- antibodies-online: Search results for available LOC100130522 related products ranked by validation data
- antibodies-online: Search results for available LOC100130522 related products ranked by validation data
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for PARD6G-AS1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for PARD6G-AS1
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Sources for PARD6G-AS1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB