Aliases for PAPOLA-DT Gene

Data sources for PAPOLA-DT Gene:

Subcategory (RNA class) for PAPOLA-DT Gene

lncRNA

Aliases for PAPOLA-DT Gene

External Ids for PAPOLA-DT Gene

Summaries for PAPOLA-DT Gene

GeneCards Summary for PAPOLA-DT Gene

PAPOLA-DT (PAPOLA Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for PAPOLA-DT Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PAPOLA-DT Gene

Genomics for PAPOLA-DT Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PAPOLA-DT Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J096500 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 250.7 -0.5 -475 4 TBP ZBTB10 MXD4 FEZF1 SIX5 MNT IKZF1 SMAD5 ETS1 MBD2 PAPOLA ENSG00000260806 NONHSAG015829.2-001 PAPOLA-DT hsa-miR-5095-139 SNHG10 SCARNA13 VRK1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PAPOLA-DT on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PAPOLA-DT Gene

Latest Assembly
chr14:96,501,648-96,502,326
(GRCh38/hg38)
Size:
679 bases
Orientation:
Minus strand

Previous Assembly
chr14:96,967,985-96,968,663
(GRCh37/hg19 by Entrez Gene)
Size:
679 bases
Orientation:
Minus strand

Genomic View for PAPOLA-DT Gene

Genes around PAPOLA-DT on UCSC Golden Path with GeneCards custom track
PAPOLA-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
PAPOLA-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PAPOLA-DT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PAPOLA-DT Gene

Proteins for PAPOLA-DT Gene

Post-translational modifications for PAPOLA-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for PAPOLA-DT Gene

Domains & Families for PAPOLA-DT Gene

Gene Families for PAPOLA-DT Gene

genes like me logo Genes that share domains with PAPOLA-DT: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PAPOLA-DT Gene

Function for PAPOLA-DT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PAPOLA-DT Gene

Localization for PAPOLA-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PAPOLA-DT Gene

Pathways & Interactions for PAPOLA-DT Gene

PathCards logo

SuperPathways for PAPOLA-DT Gene

No Data Available

Gene Ontology (GO) - Biological Process for PAPOLA-DT Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PAPOLA-DT Gene

Drugs & Compounds for PAPOLA-DT Gene

No Compound Related Data Available

Transcripts for PAPOLA-DT Gene

PAPOLA-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

mRNA/cDNA for PAPOLA-DT Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for PAPOLA-DT Gene

No ASD Table

Relevant External Links for PAPOLA-DT Gene

GeneLoc Exon Structure for
PAPOLA-DT

Expression for PAPOLA-DT Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for PAPOLA-DT

SOURCE GeneReport for Unigene cluster for PAPOLA-DT Gene:

Hs.647565
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PAPOLA-DT Gene

Orthologs for PAPOLA-DT Gene

No data available for Orthologs and Evolution for PAPOLA-DT Gene

Paralogs for PAPOLA-DT Gene

No data available for Paralogs for PAPOLA-DT Gene

Variants for PAPOLA-DT Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for PAPOLA-DT Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for PAPOLA-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PAPOLA-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PAPOLA-DT Gene

Disorders for PAPOLA-DT Gene

No disorders were found for PAPOLA-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PAPOLA-DT Gene

Publications for PAPOLA-DT Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for PAPOLA-DT Gene

Products for PAPOLA-DT Gene

Sources for PAPOLA-DT Gene